Protein Domain : IPR010114

Type:  Family Name:  Signal transduction response regulator, nitrogen regulation NR(I)
Description:  Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK.A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ].This entry represents Nitrogen regulatory protein C (NtrC), which is a bacterial enhancer-binding protein that activates the transcription of genes encoding enzymes required for nitrogen metabolism. It is phosphorylated by NtrB and interacts with sigma-54. One of the best studied examples is its activation of the gene glnA, which encodes the enzyme glutamine synthetase [].NtrC is composed of three domains [, ]. The 124 residue N-terminal domain is homologous to receiver domains of other response regulator proteins in two-component signal transduction systems [, ]. The 240 residue central domain of NtrC is homologous to a domain found in all activators of the sigma-54 RNA polymerase holoenzyme [, ]. The C-terminal domain has been indicated to contain the determinants necessary for both DNA-binding and dimerization of full-length NtrC. Short Name:  Sig_transdc_resp-reg_NtrC

0 Child Features

4 Contains

DB identifier Type Name
IPR009057 Domain Homeodomain-like
IPR001789 Domain Signal transduction response regulator, receiver domain
IPR002197 Domain DNA binding HTH domain, Fis-type
IPR002078 Domain RNA polymerase sigma factor 54 interaction domain

1 Cross References

Identifier
TIGR01818

0 Found In

5 GO Annotations

GO Term Gene Name
GO:0000156 IPR010114
GO:0003677 IPR010114
GO:0005524 IPR010114
GO:0000160 IPR010114
GO:0006808 IPR010114

5 Ontology Annotations

GO Term Gene Name
GO:0000156 IPR010114
GO:0003677 IPR010114
GO:0005524 IPR010114
GO:0000160 IPR010114
GO:0006808 IPR010114

0 Parent Features

0 Proteins

13 Publications

First Author Title Year Journal Volume Pages PubMed ID
            2517036
            12372152
            10966457
            16176121
            18076326
            11934609
            11489844
            3020561
            2677638
            10512705
            3011408
            8331061
            3304660