Protein Domain : IPR017073

Type:  Family Name:  Ubiquitin binding protein, Hrs/VPS27
Description:  Members of this group are characterised by the presence of a VHS (Vps27p/Hrs/Stam) domain in the N-terminal portion followed by a FYVE domain and one or two ubiquitin-interacting motifs.VHS domains are found at the N termini of select proteins involved in intracellular membrane trafficking and are often localised to membranes. FYVE domains are membrane localisation domains that specifically bind phosphatidylinositol 3-phosphate, regulating membrane trafficking and signalling pathways []. The ubiquitin-interacting motif is found in many proteins involved in the endocytic pathway and is capable of binding ubiquitin.The three dimensional structure of the VHS and FYVE tandem domain unit of Drosophila melanogaster(Fruit fly) Hrs reveals a pyramidal structure in which the much larger VHS domain forms a rectangular base and the FYVE domain occupies the apical end. The VHS domain is composed of an unusual superhelix of eight alpha helices, and the FYVE domain is mainly built of loops, two double-stranded antiparallel sheets, and a helix stabilised by two tetrahedrally coordinated zinc atoms. Dimerisation creates two identical pockets designed for binding ligands with multiple negative charges such as citrate or phosphatidylinositol 3-phosphate []. The FYVE domain of the Hrs orthologue in yeast is consistent with this structure [].Members of this group regulate endosome maturation and trafficking between endosomes and the degradative organelles (lysosome/vacuole) []. Monoubiquitination functions as a signal for sorting transmembrane proteins into intraluminal vesicles of multivesicular bodies (MVB) and subsequent delivery to the degradative organelles []. The sorting of proteins into the inner vesicles of multivesicular bodies is required for many key cellular processes, ranging from the downregulation of activated signalling receptors to the proper stimulation of the immune response [, ]. A molecular machine that contains the ubiquitin-binding protein Hrs as well as three multi-subunit complexes, ESCRT (endosome-associated complex required for transport) -I, -II and -III, are essential for both sorting and MVB formation [, ].A conserved sequence motif, PT/(S)AP, found in structural proteins of several RNA viruses (e.g. HIV gag), promotes release of virus from the cell by recruiting the ESCRT machinery to the viral budding sites at the plasma membrane. The same motif is also found in Hrs and recruits the ESCRT I complex to endosomes through direct interaction with one of its components, TSG101. Fusion of Hrs with the gag gene of HIV-1 lacking this motif can complement a defect in virus budding. Further challenging data indicate a wider role for Hrs in the regulation of endosome dynamics [].Rat GalCer expression factor 1 (GEF-1), which shows high sequence similarity to Hrs, induces GalCer expression, morphological changes, and cell growth inhibition in COS-7 cells []. Short Name:  Ubi-bd_Hrs_VPS27

0 Child Features

5 Contains

DB identifier Type Name
IPR018205 Domain VHS subgroup
IPR002014 Domain VHS domain
IPR017455 Domain Zinc finger, FYVE-related
IPR000306 Domain FYVE zinc finger
IPR003903 Conserved_site Ubiquitin interacting motif

1 Cross References

Identifier
PIRSF036956

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

0 Proteins

10 Publications

First Author Title Year Journal Volume Pages PubMed ID
            10693761
            9697764
            10367894
            10092582
            14624836
            12461556
            11555416
            11555619
            12892785
            11832215