Protein Family : RNA-binding (RRM/RBD/RNP motifs) family protein 121344255

Method ID:  5274 Method Name:  Embryophyte
Sequence Alignment:  View MSA Member Count:  171

171 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30055.t000039 (1 of 3) K13161 - heterogeneous nuclear ribonucleoprotein R (HNRNPR) R. communis v0.1 3949   30055: 251515-255463
28629.t000004 (1 of 3) K13161 - heterogeneous nuclear ribonucleoprotein R (HNRNPR) R. communis v0.1 3987   28629: 25235-29221
27964.t000020 (1 of 1) PTHR24012//PTHR24012:SF479 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN R. communis v0.1 4785   27964: 164741-169525
Cucsa.185730 (1 of 3) KOG0117 - Heterogeneous nuclear ribonucleoprotein R (RRM superfamily) C. sativus v1.0 5953   scaffold01274: 1180200-1186152
Cucsa.259640 (1 of 1) PTHR24012:SF479 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN C. sativus v1.0 5712   scaffold02229: 6041328-6047039
orange1.1g011574m.g (1 of 2) PTHR24012:SF479 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN C. sinensis v1.1 4039   scaffold00021: 859209-863247
orange1.1g011105m.g (1 of 4) KOG0117 - Heterogeneous nuclear ribonucleoprotein R (RRM superfamily) C. sinensis v1.1 5942   scaffold00018: 155014-160955
orange1.1g011693m.g (1 of 1) KOG0131//KOG0144//KOG0148//KOG4205 - Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) // RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 C. sinensis v1.1 5379   scaffold00082: 312257-317635
AT4G00830 (1 of 1) PTHR24012//PTHR24012:SF479 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN A. thaliana TAIR10 3218   Chr4: 352016-355233
AT3G52660 (1 of 2) K13161 - heterogeneous nuclear ribonucleoprotein R (HNRNPR) A. thaliana TAIR10 3294   Chr3: 19521660-19524953
Thhalv10010358m.g (1 of 4) KOG0117 - Heterogeneous nuclear ribonucleoprotein R (RRM superfamily) E. salsugineum v1.0 3384   scaffold_16: 1445977-1449360
Thhalv10028602m.g (1 of 1) PTHR24012:SF479 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN E. salsugineum v1.0 3243   scaffold_3: 575141-578383
Ciclev10011562m.g (1 of 4) KOG0117 - Heterogeneous nuclear ribonucleoprotein R (RRM superfamily) C. clementina v1.0 5512   scaffold_6: 20426504-20432015
Ciclev10028342m.g (1 of 1) KOG0131//KOG0144//KOG0148//KOG4205 - Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) // RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 C. clementina v1.0 5448   scaffold_8: 19493344-19498791
Ciclev10031378m.g (1 of 1) KOG0123//KOG0148 - Polyadenylate-binding protein (RRM superfamily) // Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) C. clementina v1.0 4041   scaffold_4: 816826-820866
Lus10021351.g (1 of 7) KOG0117 - Heterogeneous nuclear ribonucleoprotein R (RRM superfamily) L. usitatissimum v1.0 2330   scaffold1123: 660155-662484
Lus10002689.g (1 of 2) PTHR24012:SF479 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN L. usitatissimum v1.0 1826   scaffold1347: 103255-105080
Lus10030207.g (1 of 2) PTHR24012:SF479 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN L. usitatissimum v1.0 1817   scaffold217: 228353-230169
Lus10043390.g (1 of 1) KOG0123//KOG0144//KOG0148//KOG4205 - Polyadenylate-binding protein (RRM superfamily) // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) // RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 L. usitatissimum v1.0 3394   scaffold25: 2652061-2655454
Lus10034195.g (1 of 1) KOG0144//KOG0148//KOG4205 - RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) // RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 L. usitatissimum v1.0 3112   scaffold292: 1528656-1531767
Gorai.002G239200 (1 of 1) KOG0110//KOG0131//KOG0148 - RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) G. raimondii v2.1 3950   Chr02: 60266120-60270069
Gorai.004G010000 (1 of 5) KOG0117 - Heterogeneous nuclear ribonucleoprotein R (RRM superfamily) G. raimondii v2.1 5263   Chr04: 717045-722307
Gorai.009G085100 (1 of 5) KOG0117 - Heterogeneous nuclear ribonucleoprotein R (RRM superfamily) G. raimondii v2.1 5987   Chr09: 6196009-6201995
Gorai.009G401300 (1 of 5) KOG0117 - Heterogeneous nuclear ribonucleoprotein R (RRM superfamily) G. raimondii v2.1 4802   Chr09: 57890540-57895341
Gorai.007G112300 (1 of 1) PTHR24012:SF479 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN G. raimondii v2.1 4971   Chr07: 8678759-8683729
Thecc1EG005051 (1 of 1) PTHR24012//PTHR24012:SF479 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN T. cacao v1.1 5210   scaffold_1: 34812787-34817996
Thecc1EG022611 (1 of 1) KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains T. cacao v1.1 6485   scaffold_5: 6037262-6043746
Thecc1EG041396 (1 of 1) KOG0117//KOG0131 - Heterogeneous nuclear ribonucleoprotein R (RRM superfamily) // Splicing factor 3b, subunit 4 T. cacao v1.1 7526   scaffold_9: 37422583-37430108
Migut.L01787 (1 of 4) KOG0117 - Heterogeneous nuclear ribonucleoprotein R (RRM superfamily) M. guttatus v2.0 5142   scaffold_12: 25381643-25386784
Migut.B01919 (1 of 1) PTHR24012:SF479 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN M. guttatus v2.0 4091   scaffold_2: 19058190-19062280

171 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
27964.m000365 R. communis v0.1 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5274 Embryophyte
30055.m001569 R. communis v0.1 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5274 Embryophyte
28629.m000549 R. communis v0.1 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5274 Embryophyte
Cucsa.259640.1 C. sativus v1.0 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5274 Embryophyte
Cucsa.185730.1 C. sativus v1.0 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5274 Embryophyte
orange1.1g011693m C. sinensis v1.1 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5274 Embryophyte
orange1.1g011105m C. sinensis v1.1 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5274 Embryophyte
orange1.1g011574m C. sinensis v1.1 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5274 Embryophyte
AT3G52660.1 A. thaliana TAIR10 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5274 Embryophyte
AT4G00830.1 A. thaliana TAIR10 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5274 Embryophyte
Thhalv10028602m E. salsugineum v1.0 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5274 Embryophyte
Thhalv10010358m E. salsugineum v1.0 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5274 Embryophyte
Ciclev10011562m C. clementina v1.0 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5274 Embryophyte
Ciclev10031378m C. clementina v1.0 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5274 Embryophyte
Ciclev10028342m C. clementina v1.0 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5274 Embryophyte
Lus10002689 L. usitatissimum v1.0 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 5 5274 Embryophyte
Lus10021351 L. usitatissimum v1.0 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 5 5274 Embryophyte
Lus10030207 L. usitatissimum v1.0 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 5 5274 Embryophyte
Lus10034195 L. usitatissimum v1.0 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 5 5274 Embryophyte
Lus10043390 L. usitatissimum v1.0 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 5 5274 Embryophyte
Gorai.004G010000.1 G. raimondii v2.1 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 5 5274 Embryophyte
Gorai.009G401300.1 G. raimondii v2.1 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 5 5274 Embryophyte
Gorai.007G112300.1 G. raimondii v2.1 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 5 5274 Embryophyte
Gorai.002G239200.1 G. raimondii v2.1 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 5 5274 Embryophyte
Gorai.009G085100.1 G. raimondii v2.1 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 5 5274 Embryophyte
Thecc1EG005051t1 T. cacao v1.1 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5274 Embryophyte
Thecc1EG022611t1 T. cacao v1.1 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5274 Embryophyte
Thecc1EG041396t1 T. cacao v1.1 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5274 Embryophyte
Migut.L01787.1.p M. guttatus v2.0 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5274 Embryophyte
Migut.B01919.1.p M. guttatus v2.0 121344255 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5274 Embryophyte