Protein Family : ligatin, putative, expressed 123424674

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  74

74 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
77083 (1 of 1) PTHR12217 - LIGATIN S. moellendorffii v1.0 2237   scaffold_1: 695131-697367
29910.t000043 (1 of 1) K15027 - translation initiation factor 2D (EIF2D) R. communis v0.1 7622   29910: 474674-482295
Cucsa.088500 (1 of 1) PTHR12217 - LIGATIN C. sativus v1.0 5683   scaffold00888: 788619-794301
orange1.1g010169m.g (1 of 1) PTHR12217 - LIGATIN C. sinensis v1.1 7130   scaffold01331: 21143-28272
AT1G71350 (1 of 1) K15027 - translation initiation factor 2D (EIF2D) A. thaliana TAIR10 2824   Chr1: 26888408-26891231
Thhalv10018306m.g (1 of 1) PTHR12217 - LIGATIN E. salsugineum v1.0 2954   scaffold_9: 4023974-4026927
Ciclev10019359m.g (1 of 1) PTHR12217 - LIGATIN C. clementina v1.0 7116   scaffold_3: 22814310-22821425
Lus10041458.g (1 of 2) PTHR12217 - LIGATIN L. usitatissimum v1.0 3081   scaffold272: 178979-182059
Lus10034314.g (1 of 2) PTHR12217 - LIGATIN L. usitatissimum v1.0 3121   scaffold310: 561865-564985
Gorai.004G267600 (1 of 1) PTHR12217 - LIGATIN G. raimondii v2.1 6711   Chr04: 60273202-60279912
fgenesh1_pg_5_num_363 (1 of 1) PTHR12217 - LIGATIN C. subellipsoidea C-169 v2.0 4171   scaffold_5: 2635021-2639191
estExt_Genemark1.C_7_t10390 (1 of 1) PTHR12217 - LIGATIN M. pusilla CCMP1545 v3.0 2272   scaffold_7: 815794-818065
estExt_Genewise2.C_Chr_090195 (1 of 1) PTHR12217 - LIGATIN M. sp RCC299 v3.0 2016   Chr_09: 351882-353897
eugene.0100010099 (1 of 1) PTHR12217 - LIGATIN O. lucimarinus v2.0 1695   Chr_1: 177742-179436
Thecc1EG036324 (1 of 1) K15027 - translation initiation factor 2D (EIF2D) T. cacao v1.1 12147   scaffold_8: 18140430-18152576
Migut.C01395 (1 of 1) PTHR12217 - LIGATIN M. guttatus v2.0 5011   scaffold_3: 18789688-18794698
Araha.10781s0002 (1 of 1) PTHR12217 - LIGATIN A. halleri v1.1 2992   Scaffold10781: 6415-9406
Cagra.0147s0009 (1 of 1) PTHR12217 - LIGATIN C. grandiflora v1.1 2736   Scaffold147: 29383-32118
Glyma.09G001900 (1 of 2) PTHR12217 - LIGATIN G. max Wm82.a2.v1 6386   Chr09: 144451-150836
Glyma.12G241600 (1 of 2) PTHR12217 - LIGATIN G. max Wm82.a2.v1 6439   Chr12: 39989461-39995899
Brara.G03041 (1 of 1) PTHR12217 - LIGATIN B. rapa FPsc v1.3 3059   A07: 24014676-24017734
Bostr.10273s0215 (1 of 1) PTHR12217 - LIGATIN B. stricta v1.2 3063   Scaffold10273: 1189384-1192446
Cre06.g303650 (1 of 1) K15027 - translation initiation factor 2D (EIF2D) C. reinhardtii v5.6 7146   chromosome_6: 7961681-7968826
Medtr4g030200 (1 of 1) PTHR12217 - LIGATIN M. truncatula Mt4.0v1 8454   chr4: 10407181-10415634
SapurV1A.0109s0020 (1 of 1) K15027 - translation initiation factor 2D (EIF2D) S. purpurea v1.0 9697   chr13: 11693040-11702736
evm_27.TU.AmTr_v1.0_scaffold00099.79 (1 of 1) PTHR12217 - LIGATIN A. trichopoda v1.0 14659   AmTr_v1.0_scaffold00099: 1202727-1217385
Traes_7BS_B149AA17C (1 of 1) KOG2522 - Filamentous baseplate protein Ligatin, contains PUA domain T. aestivum v2.2 5826   ta_iwgsc_7bs_v1_3148094: 2545-8370
Traes_7DS_1683F0E99 (1 of 4) PTHR12217 - LIGATIN T. aestivum v2.2 5753   ta_iwgsc_7ds_v1_3906701: 7969-13721
Eucgr.A01322 (1 of 1) PTHR12217 - LIGATIN E. grandis v2.0 5643   Chr01: 8216851-8222493
Prupe.8G004200 (1 of 1) PTHR12217 - LIGATIN P. persica v2.1 7737   Pp08: 320728-328464

74 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
77083 S. moellendorffii v1.0 123424674 ligatin, putative, expressed 1 5275 Viridiplantae
29910.m000952 R. communis v0.1 123424674 ligatin, putative, expressed 1 5275 Viridiplantae
Cucsa.088500.1 C. sativus v1.0 123424674 ligatin, putative, expressed 1 5275 Viridiplantae
orange1.1g010169m C. sinensis v1.1 123424674 ligatin, putative, expressed 1 5275 Viridiplantae
AT1G71350.1 A. thaliana TAIR10 123424674 ligatin, putative, expressed 1 5275 Viridiplantae
Thhalv10018306m E. salsugineum v1.0 123424674 ligatin, putative, expressed 1 5275 Viridiplantae
Ciclev10019359m C. clementina v1.0 123424674 ligatin, putative, expressed 1 5275 Viridiplantae
Lus10041458 L. usitatissimum v1.0 123424674 ligatin, putative, expressed 2 5275 Viridiplantae
Lus10034314 L. usitatissimum v1.0 123424674 ligatin, putative, expressed 2 5275 Viridiplantae
Gorai.004G267600.1 G. raimondii v2.1 123424674 ligatin, putative, expressed 1 5275 Viridiplantae
41160 C. subellipsoidea C-169 v2.0 123424674 ligatin, putative, expressed 1 5275 Viridiplantae
194231 M. pusilla CCMP1545 v3.0 123424674 ligatin, putative, expressed 1 5275 Viridiplantae
91574 M. sp RCC299 v3.0 123424674 ligatin, putative, expressed 1 5275 Viridiplantae
28705 O. lucimarinus v2.0 123424674 ligatin, putative, expressed 1 5275 Viridiplantae
Thecc1EG036324t1 T. cacao v1.1 123424674 ligatin, putative, expressed 1 5275 Viridiplantae
Migut.C01395.1.p M. guttatus v2.0 123424674 ligatin, putative, expressed 1 5275 Viridiplantae
Araha.10781s0002.1.p A. halleri v1.1 123424674 ligatin, putative, expressed 1 5275 Viridiplantae
Cagra.0147s0009.1.p C. grandiflora v1.1 123424674 ligatin, putative, expressed 1 5275 Viridiplantae
Glyma.09G001900.1.p G. max Wm82.a2.v1 123424674 ligatin, putative, expressed 2 5275 Viridiplantae
Glyma.12G241600.1.p G. max Wm82.a2.v1 123424674 ligatin, putative, expressed 2 5275 Viridiplantae
Brara.G03041.1.p B. rapa FPsc v1.3 123424674 ligatin, putative, expressed 1 5275 Viridiplantae
Bostr.10273s0215.1.p B. stricta v1.2 123424674 ligatin, putative, expressed 1 5275 Viridiplantae
Cre06.g303650.t1.1 C. reinhardtii v5.6 123424674 ligatin, putative, expressed 1 5275 Viridiplantae
Medtr4g030200.1 M. truncatula Mt4.0v1 123424674 ligatin, putative, expressed 1 5275 Viridiplantae
SapurV1A.0109s0020.1.p S. purpurea v1.0 123424674 ligatin, putative, expressed 1 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00099.79 A. trichopoda v1.0 123424674 ligatin, putative, expressed 1 5275 Viridiplantae
Traes_7BS_B149AA17C.1 T. aestivum v2.2 123424674 ligatin, putative, expressed 2 5275 Viridiplantae
Traes_7DS_1683F0E99.4 T. aestivum v2.2 123424674 ligatin, putative, expressed 2 5275 Viridiplantae
Eucgr.A01322.1.p E. grandis v2.0 123424674 ligatin, putative, expressed 1 5275 Viridiplantae
Prupe.8G004200.1.p P. persica v2.1 123424674 ligatin, putative, expressed 1 5275 Viridiplantae