Protein Family : sequence-specific DNA binding transcription factors 123428704

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  82

82 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
130273 (1 of 1) KOG2917 - Predicted exosome subunit S. moellendorffii v1.0 1310   scaffold_100: 421269-422578
29648.t000004 (1 of 1) K14574 - ribosome maturation protein SDO1 (SDO1, SBDS) R. communis v0.1 2479   29648: 36375-38853
Cucsa.004920 (1 of 1) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS C. sativus v1.0 2810   scaffold00055: 19337-22146
orange1.1g042018m.g (1 of 1) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS C. sinensis v1.1 2689   scaffold00002: 207064-209752
AT1G43860 (1 of 1) K14574 - ribosome maturation protein SDO1 (SDO1, SBDS) A. thaliana TAIR10 2402   Chr1: 16622068-16624469
Thhalv10011594m.g (1 of 1) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS E. salsugineum v1.0 2299   scaffold_7: 13617454-13619752
Ciclev10001639m.g (1 of 1) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS C. clementina v1.0 2885   scaffold_5: 38186495-38189379
Lus10029749.g (1 of 2) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS L. usitatissimum v1.0 2051   scaffold418: 1016173-1018223
Lus10042780.g (1 of 2) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS L. usitatissimum v1.0 2383   scaffold67: 2014812-2017194
Gorai.005G083500 (1 of 1) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS G. raimondii v2.1 2728   Chr05: 10291338-10294065
gw1.2.461.1 (1 of 1) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS C. subellipsoidea C-169 v2.0 1422   scaffold_2: 1872030-1873451
MicpuC2.e_gw1.6.637.1 (1 of 1) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS M. pusilla CCMP1545 v3.0 594   scaffold_6: 595159-595752
MicpuC2.EuGene.0000060310   M. pusilla CCMP1545 v3.0 810   scaffold_6: 595892-596701
e_gw2.04.881.1 (1 of 1) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS M. sp RCC299 v3.0 543   Chr_04: 1002527-1003069
gwEuk.6.354.1 (1 of 1) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS O. lucimarinus v2.0 708   Chr_6: 243126-243833
Thecc1EG035364 (1 of 1) K14574 - ribosome maturation protein SDO1 (SDO1, SBDS) T. cacao v1.1 2894   scaffold_8: 8422485-8425378
Migut.C01102 (1 of 1) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS M. guttatus v2.0 2775   scaffold_3: 17421999-17424773
Araha.54171s0002 (1 of 1) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS A. halleri v1.1 2621   Scaffold54171: 8484-11104
Cagra.2493s0001 (1 of 1) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS C. grandiflora v1.1 2427   Scaffold2493: 287-2713
Glyma.11G142700 (1 of 2) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS G. max Wm82.a2.v1 3685   Chr11: 10889488-10893172
Glyma.14G119400 (1 of 2) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS G. max Wm82.a2.v1 4251   Chr14: 16667981-16672231
Brara.E01759 (1 of 1) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS B. rapa FPsc v1.3 1705   A05: 12926677-12928381
Bostr.12302s0053 (1 of 1) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS B. stricta v1.2 2243   Scaffold12302: 908578-910820
Cre01.g017500 (1 of 1) K14574 - ribosome maturation protein SDO1 (SDO1, SBDS) C. reinhardtii v5.6 3842   chromosome_1: 2879003-2882844
Medtr6g085170 (1 of 1) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS M. truncatula Mt4.0v1 5585   chr6: 32124321-32129905
SapurV1A.0261s0100 (1 of 1) K14574 - ribosome maturation protein SDO1 (SDO1, SBDS) S. purpurea v1.0 2835   chr05: 14074251-14077085
evm_27.TU.AmTr_v1.0_scaffold00071.10 (1 of 1) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS A. trichopoda v1.0 16108   AmTr_v1.0_scaffold00071: 116758-132865
Traes_2AL_D92059722 (1 of 5) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS T. aestivum v2.2 2580   ta_iwgsc_2al_v1_6407769: 14848-17427
Traes_2BL_EAFC5CF3D (1 of 2) KOG2917 - Predicted exosome subunit T. aestivum v2.2 2875   ta_iwgsc_2bl_v1_7948731: 3640-6514
Traes_2DL_FC9F0FF61 (1 of 2) KOG2917 - Predicted exosome subunit T. aestivum v2.2 3184   ta_iwgsc_2dl_v1_9873143: 1160-4343

82 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
130273 S. moellendorffii v1.0 123428704 sequence-specific DNA binding transcription factors 1 5275 Viridiplantae
29648.m001917 R. communis v0.1 123428704 sequence-specific DNA binding transcription factors 1 5275 Viridiplantae
Cucsa.004920.1 C. sativus v1.0 123428704 sequence-specific DNA binding transcription factors 1 5275 Viridiplantae
orange1.1g042018m C. sinensis v1.1 123428704 sequence-specific DNA binding transcription factors 1 5275 Viridiplantae
AT1G43860.1 A. thaliana TAIR10 123428704 sequence-specific DNA binding transcription factors 1 5275 Viridiplantae
Thhalv10011594m E. salsugineum v1.0 123428704 sequence-specific DNA binding transcription factors 1 5275 Viridiplantae
Ciclev10001639m C. clementina v1.0 123428704 sequence-specific DNA binding transcription factors 1 5275 Viridiplantae
Lus10042780 L. usitatissimum v1.0 123428704 sequence-specific DNA binding transcription factors 2 5275 Viridiplantae
Lus10029749 L. usitatissimum v1.0 123428704 sequence-specific DNA binding transcription factors 2 5275 Viridiplantae
Gorai.005G083500.1 G. raimondii v2.1 123428704 sequence-specific DNA binding transcription factors 1 5275 Viridiplantae
5722 C. subellipsoidea C-169 v2.0 123428704 sequence-specific DNA binding transcription factors 1 5275 Viridiplantae
58801 M. pusilla CCMP1545 v3.0 123428704 sequence-specific DNA binding transcription factors 2 5275 Viridiplantae
18039 M. pusilla CCMP1545 v3.0 123428704 sequence-specific DNA binding transcription factors 2 5275 Viridiplantae
81292 M. sp RCC299 v3.0 123428704 sequence-specific DNA binding transcription factors 1 5275 Viridiplantae
5118 O. lucimarinus v2.0 123428704 sequence-specific DNA binding transcription factors 1 5275 Viridiplantae
Thecc1EG035364t1 T. cacao v1.1 123428704 sequence-specific DNA binding transcription factors 1 5275 Viridiplantae
Migut.C01102.1.p M. guttatus v2.0 123428704 sequence-specific DNA binding transcription factors 1 5275 Viridiplantae
Araha.54171s0002.1.p A. halleri v1.1 123428704 sequence-specific DNA binding transcription factors 1 5275 Viridiplantae
Cagra.2493s0001.1.p C. grandiflora v1.1 123428704 sequence-specific DNA binding transcription factors 1 5275 Viridiplantae
Glyma.11G142700.1.p G. max Wm82.a2.v1 123428704 sequence-specific DNA binding transcription factors 2 5275 Viridiplantae
Glyma.14G119400.1.p G. max Wm82.a2.v1 123428704 sequence-specific DNA binding transcription factors 2 5275 Viridiplantae
Brara.E01759.1.p B. rapa FPsc v1.3 123428704 sequence-specific DNA binding transcription factors 1 5275 Viridiplantae
Bostr.12302s0053.1.p B. stricta v1.2 123428704 sequence-specific DNA binding transcription factors 1 5275 Viridiplantae
Cre01.g017500.t1.2 C. reinhardtii v5.6 123428704 sequence-specific DNA binding transcription factors 1 5275 Viridiplantae
Medtr6g085170.1 M. truncatula Mt4.0v1 123428704 sequence-specific DNA binding transcription factors 1 5275 Viridiplantae
SapurV1A.0261s0100.1.p S. purpurea v1.0 123428704 sequence-specific DNA binding transcription factors 1 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00071.10 A. trichopoda v1.0 123428704 sequence-specific DNA binding transcription factors 1 5275 Viridiplantae
Traes_2AL_D92059722.1 T. aestivum v2.2 123428704 sequence-specific DNA binding transcription factors 3 5275 Viridiplantae
Traes_2DL_FC9F0FF61.1 T. aestivum v2.2 123428704 sequence-specific DNA binding transcription factors 3 5275 Viridiplantae
Traes_2BL_EAFC5CF3D.1 T. aestivum v2.2 123428704 sequence-specific DNA binding transcription factors 3 5275 Viridiplantae