Gene : 154179 S. moellendorffii v1.0
Defline:  (1 of 1) PTHR11254//PTHR11254:SF334 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE Genomic Order:  80
Name:  ? 154179 Secondary Identifier:  ? PAC:15423310
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Smoellendorffii PWY-7511 Selaginella moellendorffii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
154179 0.5kb upstream 0.5kb upstream 12149 true scaffold_46: 1157647-1169795 Selaginella moellendorffii
154179 0.5kb upstream 0.5kb upstream 500 false scaffold_46: 1169296-1169795 Selaginella moellendorffii
154179 0.5kb downstream 0.5kb downstream 12149 true scaffold_46: 1157147-1169295 Selaginella moellendorffii
154179 0.5kb downstream 0.5kb downstream 500 false scaffold_46: 1157147-1157646 Selaginella moellendorffii
154179 1.0kb upstream 1.0kb upstream 12649 true scaffold_46: 1157647-1170295 Selaginella moellendorffii
154179 1.0kb upstream 1.0kb upstream 1000 false scaffold_46: 1169296-1170295 Selaginella moellendorffii
154179 1.0kb downstream 1.0kb downstream 12649 true scaffold_46: 1156647-1169295 Selaginella moellendorffii
154179 1.0kb downstream 1.0kb downstream 1000 false scaffold_46: 1156647-1157646 Selaginella moellendorffii
154179 2.0kb upstream 2.0kb upstream 13649 true scaffold_46: 1157647-1171295 Selaginella moellendorffii
154179 2.0kb upstream 2.0kb upstream 2000 false scaffold_46: 1169296-1171295 Selaginella moellendorffii
154179 2.0kb downstream 2.0kb downstream 13649 true scaffold_46: 1155647-1169295 Selaginella moellendorffii
154179 2.0kb downstream 2.0kb downstream 2000 false scaffold_46: 1155647-1157646 Selaginella moellendorffii
154179 5.0kb upstream 5.0kb upstream 16649 true scaffold_46: 1157647-1174295 Selaginella moellendorffii
154179 5.0kb upstream 5.0kb upstream 5000 false scaffold_46: 1169296-1174295 Selaginella moellendorffii
154179 5.0kb downstream 5.0kb downstream 16649 true scaffold_46: 1152647-1169295 Selaginella moellendorffii
154179 5.0kb downstream 5.0kb downstream 5000 false scaffold_46: 1152647-1157646 Selaginella moellendorffii
154179 10.0kb upstream 10.0kb upstream 21649 true scaffold_46: 1157647-1179295 Selaginella moellendorffii
154179 10.0kb upstream 10.0kb upstream 10000 false scaffold_46: 1169296-1179295 Selaginella moellendorffii
154179 10.0kb downstream 10.0kb downstream 21649 true scaffold_46: 1147647-1169295 Selaginella moellendorffii
154179 10.0kb downstream 10.0kb downstream 10000 false scaffold_46: 1147647-1157646 Selaginella moellendorffii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121319873 5274 Embryophyte Singleton cluster - no MSA
123356963 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain