Gene : 113633 S. moellendorffii v1.0
Defline:  (1 of 1) PF00295//PF12708 - Glycosyl hydrolases family 28 (Glyco_hydro_28) // Pectate lyase superfamily protein (Pectate_lyase_3) Genomic Order:  280
Name:  ? 113633 Secondary Identifier:  ? PAC:15417766
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Smoellendorffii PWY-1081 Selaginella moellendorffii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
113633 0.5kb upstream 0.5kb upstream 2292 true scaffold_47: 1426272-1428563 Selaginella moellendorffii
113633 0.5kb upstream 0.5kb upstream 500 false scaffold_47: 1426272-1426771 Selaginella moellendorffii
113633 0.5kb downstream 0.5kb downstream 2292 true scaffold_47: 1426772-1429063 Selaginella moellendorffii
113633 0.5kb downstream 0.5kb downstream 500 false scaffold_47: 1428564-1429063 Selaginella moellendorffii
113633 1.0kb upstream 1.0kb upstream 2792 true scaffold_47: 1425772-1428563 Selaginella moellendorffii
113633 1.0kb upstream 1.0kb upstream 1000 false scaffold_47: 1425772-1426771 Selaginella moellendorffii
113633 1.0kb downstream 1.0kb downstream 2792 true scaffold_47: 1426772-1429563 Selaginella moellendorffii
113633 1.0kb downstream 1.0kb downstream 1000 false scaffold_47: 1428564-1429563 Selaginella moellendorffii
113633 2.0kb upstream 2.0kb upstream 3792 true scaffold_47: 1424772-1428563 Selaginella moellendorffii
113633 2.0kb upstream 2.0kb upstream 2000 false scaffold_47: 1424772-1426771 Selaginella moellendorffii
113633 2.0kb downstream 2.0kb downstream 3792 true scaffold_47: 1426772-1430563 Selaginella moellendorffii
113633 2.0kb downstream 2.0kb downstream 2000 false scaffold_47: 1428564-1430563 Selaginella moellendorffii
113633 5.0kb upstream 5.0kb upstream 6792 true scaffold_47: 1421772-1428563 Selaginella moellendorffii
113633 5.0kb upstream 5.0kb upstream 5000 false scaffold_47: 1421772-1426771 Selaginella moellendorffii
113633 5.0kb downstream 5.0kb downstream 6792 true scaffold_47: 1426772-1433563 Selaginella moellendorffii
113633 5.0kb downstream 5.0kb downstream 5000 false scaffold_47: 1428564-1433563 Selaginella moellendorffii
113633 10.0kb upstream 10.0kb upstream 11792 true scaffold_47: 1416772-1428563 Selaginella moellendorffii
113633 10.0kb upstream 10.0kb upstream 10000 false scaffold_47: 1416772-1426771 Selaginella moellendorffii
113633 10.0kb downstream 10.0kb downstream 11792 true scaffold_47: 1426772-1438563 Selaginella moellendorffii
113633 10.0kb downstream 10.0kb downstream 10000 false scaffold_47: 1428564-1438563 Selaginella moellendorffii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121319973 5274 Embryophyte Singleton cluster - no MSA
123357062 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain