Gene : Traes_1AL_40C748618 T. aestivum v2.2
Defline:  (1 of 58) PTHR15184:SF43 - ATP SYNTHASE SUBUNIT BETA, CHLOROPLASTIC Genomic Order:  1
Name:  ? Traes_1AL_40C748618 Secondary Identifier:  ? PAC:31868266
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Taestivum PWY-7219 Triticum aestivum pathologic  
Taestivum PWY-7229 Triticum aestivum pathologic  
Taestivum PWY-841 Triticum aestivum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_1AL_40C748618 0.5kb upstream 0.5kb upstream 2407 true ta_iwgsc_1al_v2_3892996: 2301-4707 Triticum aestivum
Traes_1AL_40C748618 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_1al_v2_3892996: 2301-2800 Triticum aestivum
Traes_1AL_40C748618 0.5kb downstream 0.5kb downstream 2407 true ta_iwgsc_1al_v2_3892996: 2801-5207 Triticum aestivum
Traes_1AL_40C748618 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_1al_v2_3892996: 4708-5207 Triticum aestivum
Traes_1AL_40C748618 1.0kb upstream 1.0kb upstream 2907 true ta_iwgsc_1al_v2_3892996: 1801-4707 Triticum aestivum
Traes_1AL_40C748618 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_1al_v2_3892996: 1801-2800 Triticum aestivum
Traes_1AL_40C748618 1.0kb downstream 1.0kb downstream 2873 true ta_iwgsc_1al_v2_3892996: 2801-5673 Triticum aestivum
Traes_1AL_40C748618 1.0kb downstream 1.0kb downstream 966 false ta_iwgsc_1al_v2_3892996: 4708-5673 Triticum aestivum
Traes_1AL_40C748618 2.0kb upstream 2.0kb upstream 3907 true ta_iwgsc_1al_v2_3892996: 801-4707 Triticum aestivum
Traes_1AL_40C748618 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_1al_v2_3892996: 801-2800 Triticum aestivum
Traes_1AL_40C748618 2.0kb downstream 2.0kb downstream 2873 true ta_iwgsc_1al_v2_3892996: 2801-5673 Triticum aestivum
Traes_1AL_40C748618 2.0kb downstream 2.0kb downstream 966 false ta_iwgsc_1al_v2_3892996: 4708-5673 Triticum aestivum
Traes_1AL_40C748618 5.0kb upstream 5.0kb upstream 4707 true ta_iwgsc_1al_v2_3892996: 1-4707 Triticum aestivum
Traes_1AL_40C748618 5.0kb upstream 5.0kb upstream 2800 false ta_iwgsc_1al_v2_3892996: 1-2800 Triticum aestivum
Traes_1AL_40C748618 5.0kb downstream 5.0kb downstream 2873 true ta_iwgsc_1al_v2_3892996: 2801-5673 Triticum aestivum
Traes_1AL_40C748618 5.0kb downstream 5.0kb downstream 966 false ta_iwgsc_1al_v2_3892996: 4708-5673 Triticum aestivum
Traes_1AL_40C748618 10.0kb upstream 10.0kb upstream 4707 true ta_iwgsc_1al_v2_3892996: 1-4707 Triticum aestivum
Traes_1AL_40C748618 10.0kb upstream 10.0kb upstream 2800 false ta_iwgsc_1al_v2_3892996: 1-2800 Triticum aestivum
Traes_1AL_40C748618 10.0kb downstream 10.0kb downstream 2873 true ta_iwgsc_1al_v2_3892996: 2801-5673 Triticum aestivum
Traes_1AL_40C748618 10.0kb downstream 10.0kb downstream 966 false ta_iwgsc_1al_v2_3892996: 4708-5673 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121940590 5273 Angiosperm Singleton cluster - no MSA
124514029 5269 Grass Singleton cluster - no MSA
121211083 5274 Embryophyte Singleton cluster - no MSA
123249896 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain