Gene : Traes_1AL_2EF5725B5 T. aestivum v2.2
Defline:  (1 of 3) PTHR31332:SF0 - 7-HYDROXYMETHYL CHLOROPHYLL A REDUCTASE, CHLOROPLASTIC Genomic Order:  1
Name:  ? Traes_1AL_2EF5725B5 Secondary Identifier:  ? PAC:31874190
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Taestivum PWY-5068 Triticum aestivum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_1AL_2EF5725B5 0.5kb upstream 0.5kb upstream 4267 true ta_iwgsc_1al_v2_3890510: 6326-10592 Triticum aestivum
Traes_1AL_2EF5725B5 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_1al_v2_3890510: 6326-6825 Triticum aestivum
Traes_1AL_2EF5725B5 0.5kb downstream 0.5kb downstream 4267 true ta_iwgsc_1al_v2_3890510: 6826-11092 Triticum aestivum
Traes_1AL_2EF5725B5 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_1al_v2_3890510: 10593-11092 Triticum aestivum
Traes_1AL_2EF5725B5 1.0kb upstream 1.0kb upstream 4767 true ta_iwgsc_1al_v2_3890510: 5826-10592 Triticum aestivum
Traes_1AL_2EF5725B5 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_1al_v2_3890510: 5826-6825 Triticum aestivum
Traes_1AL_2EF5725B5 1.0kb downstream 1.0kb downstream 4767 true ta_iwgsc_1al_v2_3890510: 6826-11592 Triticum aestivum
Traes_1AL_2EF5725B5 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_1al_v2_3890510: 10593-11592 Triticum aestivum
Traes_1AL_2EF5725B5 2.0kb upstream 2.0kb upstream 5767 true ta_iwgsc_1al_v2_3890510: 4826-10592 Triticum aestivum
Traes_1AL_2EF5725B5 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_1al_v2_3890510: 4826-6825 Triticum aestivum
Traes_1AL_2EF5725B5 2.0kb downstream 2.0kb downstream 5767 true ta_iwgsc_1al_v2_3890510: 6826-12592 Triticum aestivum
Traes_1AL_2EF5725B5 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_1al_v2_3890510: 10593-12592 Triticum aestivum
Traes_1AL_2EF5725B5 5.0kb upstream 5.0kb upstream 8767 true ta_iwgsc_1al_v2_3890510: 1826-10592 Triticum aestivum
Traes_1AL_2EF5725B5 5.0kb upstream 5.0kb upstream 5000 false ta_iwgsc_1al_v2_3890510: 1826-6825 Triticum aestivum
Traes_1AL_2EF5725B5 5.0kb downstream 5.0kb downstream 8767 true ta_iwgsc_1al_v2_3890510: 6826-15592 Triticum aestivum
Traes_1AL_2EF5725B5 5.0kb downstream 5.0kb downstream 5000 false ta_iwgsc_1al_v2_3890510: 10593-15592 Triticum aestivum
Traes_1AL_2EF5725B5 10.0kb upstream 10.0kb upstream 10592 true ta_iwgsc_1al_v2_3890510: 1-10592 Triticum aestivum
Traes_1AL_2EF5725B5 10.0kb upstream 10.0kb upstream 6825 false ta_iwgsc_1al_v2_3890510: 1-6825 Triticum aestivum
Traes_1AL_2EF5725B5 10.0kb downstream 10.0kb downstream 8989 true ta_iwgsc_1al_v2_3890510: 6826-15814 Triticum aestivum
Traes_1AL_2EF5725B5 10.0kb downstream 10.0kb downstream 5222 false ta_iwgsc_1al_v2_3890510: 10593-15814 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582983 5269 Grass View MSA
122042244 5273 Angiosperm View MSA
121347616 5274 Embryophyte View MSA
123428400 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain