Gene : Traes_1AL_A5B41D1FC T. aestivum v2.2
Defline:  (1 of 66) PTHR22773:SF50 - NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 5 Genomic Order:  2
Name:  ? Traes_1AL_A5B41D1FC Secondary Identifier:  ? PAC:31882508
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Taestivum PWY-3781 Triticum aestivum pathologic  
Taestivum PWY-4302 Triticum aestivum pathologic  
Taestivum PWY-5083 Triticum aestivum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_1AL_A5B41D1FC 0.5kb upstream 0.5kb upstream 1700 true ta_iwgsc_1al_v2_3962120: 1647-3346 Triticum aestivum
Traes_1AL_A5B41D1FC 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_1al_v2_3962120: 1647-2146 Triticum aestivum
Traes_1AL_A5B41D1FC 0.5kb downstream 0.5kb downstream 1700 true ta_iwgsc_1al_v2_3962120: 2147-3846 Triticum aestivum
Traes_1AL_A5B41D1FC 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_1al_v2_3962120: 3347-3846 Triticum aestivum
Traes_1AL_A5B41D1FC 1.0kb upstream 1.0kb upstream 2200 true ta_iwgsc_1al_v2_3962120: 1147-3346 Triticum aestivum
Traes_1AL_A5B41D1FC 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_1al_v2_3962120: 1147-2146 Triticum aestivum
Traes_1AL_A5B41D1FC 1.0kb downstream 1.0kb downstream 2200 true ta_iwgsc_1al_v2_3962120: 2147-4346 Triticum aestivum
Traes_1AL_A5B41D1FC 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_1al_v2_3962120: 3347-4346 Triticum aestivum
Traes_1AL_A5B41D1FC 2.0kb upstream 2.0kb upstream 3200 true ta_iwgsc_1al_v2_3962120: 147-3346 Triticum aestivum
Traes_1AL_A5B41D1FC 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_1al_v2_3962120: 147-2146 Triticum aestivum
Traes_1AL_A5B41D1FC 2.0kb downstream 2.0kb downstream 3200 true ta_iwgsc_1al_v2_3962120: 2147-5346 Triticum aestivum
Traes_1AL_A5B41D1FC 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_1al_v2_3962120: 3347-5346 Triticum aestivum
Traes_1AL_A5B41D1FC 5.0kb upstream 5.0kb upstream 3346 true ta_iwgsc_1al_v2_3962120: 1-3346 Triticum aestivum
Traes_1AL_A5B41D1FC 5.0kb upstream 5.0kb upstream 2146 false ta_iwgsc_1al_v2_3962120: 1-2146 Triticum aestivum
Traes_1AL_A5B41D1FC 5.0kb downstream 5.0kb downstream 6200 true ta_iwgsc_1al_v2_3962120: 2147-8346 Triticum aestivum
Traes_1AL_A5B41D1FC 5.0kb downstream 5.0kb downstream 5000 false ta_iwgsc_1al_v2_3962120: 3347-8346 Triticum aestivum
Traes_1AL_A5B41D1FC 10.0kb upstream 10.0kb upstream 3346 true ta_iwgsc_1al_v2_3962120: 1-3346 Triticum aestivum
Traes_1AL_A5B41D1FC 10.0kb upstream 10.0kb upstream 2146 false ta_iwgsc_1al_v2_3962120: 1-2146 Triticum aestivum
Traes_1AL_A5B41D1FC 10.0kb downstream 10.0kb downstream 6796 true ta_iwgsc_1al_v2_3962120: 2147-8942 Triticum aestivum
Traes_1AL_A5B41D1FC 10.0kb downstream 10.0kb downstream 5596 false ta_iwgsc_1al_v2_3962120: 3347-8942 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121942632 5273 Angiosperm Singleton cluster - no MSA
124516071 5269 Grass Singleton cluster - no MSA
121213125 5274 Embryophyte Singleton cluster - no MSA
123251938 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain