Gene : Traes_1BL_6E6FAE93F T. aestivum v2.2
Defline:  (1 of 7) PTHR20978:SF0 - SPLICING FACTOR 3B SUBUNIT 5 Genomic Order:  1
Name:  ? Traes_1BL_6E6FAE93F Secondary Identifier:  ? PAC:31955986
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_1BL_6E6FAE93F 0.5kb upstream 0.5kb upstream 3320 true ta_iwgsc_1bl_v1_3919874: 8358-11677 Triticum aestivum
Traes_1BL_6E6FAE93F 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_1bl_v1_3919874: 8358-8857 Triticum aestivum
Traes_1BL_6E6FAE93F 0.5kb downstream 0.5kb downstream 3288 true ta_iwgsc_1bl_v1_3919874: 8858-12145 Triticum aestivum
Traes_1BL_6E6FAE93F 0.5kb downstream 0.5kb downstream 468 false ta_iwgsc_1bl_v1_3919874: 11678-12145 Triticum aestivum
Traes_1BL_6E6FAE93F 1.0kb upstream 1.0kb upstream 3820 true ta_iwgsc_1bl_v1_3919874: 7858-11677 Triticum aestivum
Traes_1BL_6E6FAE93F 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_1bl_v1_3919874: 7858-8857 Triticum aestivum
Traes_1BL_6E6FAE93F 1.0kb downstream 1.0kb downstream 3288 true ta_iwgsc_1bl_v1_3919874: 8858-12145 Triticum aestivum
Traes_1BL_6E6FAE93F 1.0kb downstream 1.0kb downstream 468 false ta_iwgsc_1bl_v1_3919874: 11678-12145 Triticum aestivum
Traes_1BL_6E6FAE93F 2.0kb upstream 2.0kb upstream 4820 true ta_iwgsc_1bl_v1_3919874: 6858-11677 Triticum aestivum
Traes_1BL_6E6FAE93F 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_1bl_v1_3919874: 6858-8857 Triticum aestivum
Traes_1BL_6E6FAE93F 2.0kb downstream 2.0kb downstream 3288 true ta_iwgsc_1bl_v1_3919874: 8858-12145 Triticum aestivum
Traes_1BL_6E6FAE93F 2.0kb downstream 2.0kb downstream 468 false ta_iwgsc_1bl_v1_3919874: 11678-12145 Triticum aestivum
Traes_1BL_6E6FAE93F 5.0kb upstream 5.0kb upstream 7820 true ta_iwgsc_1bl_v1_3919874: 3858-11677 Triticum aestivum
Traes_1BL_6E6FAE93F 5.0kb upstream 5.0kb upstream 5000 false ta_iwgsc_1bl_v1_3919874: 3858-8857 Triticum aestivum
Traes_1BL_6E6FAE93F 5.0kb downstream 5.0kb downstream 3288 true ta_iwgsc_1bl_v1_3919874: 8858-12145 Triticum aestivum
Traes_1BL_6E6FAE93F 5.0kb downstream 5.0kb downstream 468 false ta_iwgsc_1bl_v1_3919874: 11678-12145 Triticum aestivum
Traes_1BL_6E6FAE93F 10.0kb upstream 10.0kb upstream 11677 true ta_iwgsc_1bl_v1_3919874: 1-11677 Triticum aestivum
Traes_1BL_6E6FAE93F 10.0kb upstream 10.0kb upstream 8857 false ta_iwgsc_1bl_v1_3919874: 1-8857 Triticum aestivum
Traes_1BL_6E6FAE93F 10.0kb downstream 10.0kb downstream 3288 true ta_iwgsc_1bl_v1_3919874: 8858-12145 Triticum aestivum
Traes_1BL_6E6FAE93F 10.0kb downstream 10.0kb downstream 468 false ta_iwgsc_1bl_v1_3919874: 11678-12145 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121953213 5273 Angiosperm Singleton cluster - no MSA
124526653 5269 Grass Singleton cluster - no MSA
121223706 5274 Embryophyte Singleton cluster - no MSA
123262519 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain