Gene : Traes_1BS_DDE53AF02 T. aestivum v2.2
Defline:  (1 of 5) PTHR22594:SF34 - ASPARAGINE--TRNA LIGASE, MITOCHONDRIAL-RELATED Genomic Order:  1
Name:  ? Traes_1BS_DDE53AF02 Secondary Identifier:  ? PAC:31919631
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Taestivum PWY-6842 Triticum aestivum pathologic  
Taestivum TRNA-CHARGING-PWY Triticum aestivum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_1BS_DDE53AF02 0.5kb upstream 0.5kb upstream 5994 true ta_iwgsc_1bs_v1_3423853: 1504-7497 Triticum aestivum
Traes_1BS_DDE53AF02 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_1bs_v1_3423853: 1504-2003 Triticum aestivum
Traes_1BS_DDE53AF02 0.5kb downstream 0.5kb downstream 5994 true ta_iwgsc_1bs_v1_3423853: 2004-7997 Triticum aestivum
Traes_1BS_DDE53AF02 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_1bs_v1_3423853: 7498-7997 Triticum aestivum
Traes_1BS_DDE53AF02 1.0kb upstream 1.0kb upstream 6494 true ta_iwgsc_1bs_v1_3423853: 1004-7497 Triticum aestivum
Traes_1BS_DDE53AF02 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_1bs_v1_3423853: 1004-2003 Triticum aestivum
Traes_1BS_DDE53AF02 1.0kb downstream 1.0kb downstream 6494 true ta_iwgsc_1bs_v1_3423853: 2004-8497 Triticum aestivum
Traes_1BS_DDE53AF02 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_1bs_v1_3423853: 7498-8497 Triticum aestivum
Traes_1BS_DDE53AF02 2.0kb upstream 2.0kb upstream 7494 true ta_iwgsc_1bs_v1_3423853: 4-7497 Triticum aestivum
Traes_1BS_DDE53AF02 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_1bs_v1_3423853: 4-2003 Triticum aestivum
Traes_1BS_DDE53AF02 2.0kb downstream 2.0kb downstream 7494 true ta_iwgsc_1bs_v1_3423853: 2004-9497 Triticum aestivum
Traes_1BS_DDE53AF02 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_1bs_v1_3423853: 7498-9497 Triticum aestivum
Traes_1BS_DDE53AF02 5.0kb upstream 5.0kb upstream 7497 true ta_iwgsc_1bs_v1_3423853: 1-7497 Triticum aestivum
Traes_1BS_DDE53AF02 5.0kb upstream 5.0kb upstream 2003 false ta_iwgsc_1bs_v1_3423853: 1-2003 Triticum aestivum
Traes_1BS_DDE53AF02 5.0kb downstream 5.0kb downstream 8317 true ta_iwgsc_1bs_v1_3423853: 2004-10320 Triticum aestivum
Traes_1BS_DDE53AF02 5.0kb downstream 5.0kb downstream 2823 false ta_iwgsc_1bs_v1_3423853: 7498-10320 Triticum aestivum
Traes_1BS_DDE53AF02 10.0kb upstream 10.0kb upstream 7497 true ta_iwgsc_1bs_v1_3423853: 1-7497 Triticum aestivum
Traes_1BS_DDE53AF02 10.0kb upstream 10.0kb upstream 2003 false ta_iwgsc_1bs_v1_3423853: 1-2003 Triticum aestivum
Traes_1BS_DDE53AF02 10.0kb downstream 10.0kb downstream 8317 true ta_iwgsc_1bs_v1_3423853: 2004-10320 Triticum aestivum
Traes_1BS_DDE53AF02 10.0kb downstream 10.0kb downstream 2823 false ta_iwgsc_1bs_v1_3423853: 7498-10320 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573669 5269 Grass View MSA
122045893 5273 Angiosperm View MSA
121347200 5274 Embryophyte View MSA
123425101 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain