Gene : Traes_1BS_5963FC5FC T. aestivum v2.2
Defline:  (1 of 3) PTHR10668:SF5 - BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 2 Genomic Order:  1
Name:  ? Traes_1BS_5963FC5FC Secondary Identifier:  ? PAC:31747230
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Taestivum CAROTENOID-PWY Triticum aestivum pathologic  
Taestivum PWY-6475 Triticum aestivum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_1BS_5963FC5FC 0.5kb upstream 0.5kb upstream 6003 true ta_iwgsc_1bs_v1_3461879: 736-6738 Triticum aestivum
Traes_1BS_5963FC5FC 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_1bs_v1_3461879: 736-1235 Triticum aestivum
Traes_1BS_5963FC5FC 0.5kb downstream 0.5kb downstream 6003 true ta_iwgsc_1bs_v1_3461879: 1236-7238 Triticum aestivum
Traes_1BS_5963FC5FC 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_1bs_v1_3461879: 6739-7238 Triticum aestivum
Traes_1BS_5963FC5FC 1.0kb upstream 1.0kb upstream 6503 true ta_iwgsc_1bs_v1_3461879: 236-6738 Triticum aestivum
Traes_1BS_5963FC5FC 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_1bs_v1_3461879: 236-1235 Triticum aestivum
Traes_1BS_5963FC5FC 1.0kb downstream 1.0kb downstream 6503 true ta_iwgsc_1bs_v1_3461879: 1236-7738 Triticum aestivum
Traes_1BS_5963FC5FC 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_1bs_v1_3461879: 6739-7738 Triticum aestivum
Traes_1BS_5963FC5FC 2.0kb upstream 2.0kb upstream 6738 true ta_iwgsc_1bs_v1_3461879: 1-6738 Triticum aestivum
Traes_1BS_5963FC5FC 2.0kb upstream 2.0kb upstream 1235 false ta_iwgsc_1bs_v1_3461879: 1-1235 Triticum aestivum
Traes_1BS_5963FC5FC 2.0kb downstream 2.0kb downstream 7503 true ta_iwgsc_1bs_v1_3461879: 1236-8738 Triticum aestivum
Traes_1BS_5963FC5FC 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_1bs_v1_3461879: 6739-8738 Triticum aestivum
Traes_1BS_5963FC5FC 5.0kb upstream 5.0kb upstream 6738 true ta_iwgsc_1bs_v1_3461879: 1-6738 Triticum aestivum
Traes_1BS_5963FC5FC 5.0kb upstream 5.0kb upstream 1235 false ta_iwgsc_1bs_v1_3461879: 1-1235 Triticum aestivum
Traes_1BS_5963FC5FC 5.0kb downstream 5.0kb downstream 10503 true ta_iwgsc_1bs_v1_3461879: 1236-11738 Triticum aestivum
Traes_1BS_5963FC5FC 5.0kb downstream 5.0kb downstream 5000 false ta_iwgsc_1bs_v1_3461879: 6739-11738 Triticum aestivum
Traes_1BS_5963FC5FC 10.0kb upstream 10.0kb upstream 6738 true ta_iwgsc_1bs_v1_3461879: 1-6738 Triticum aestivum
Traes_1BS_5963FC5FC 10.0kb upstream 10.0kb upstream 1235 false ta_iwgsc_1bs_v1_3461879: 1-1235 Triticum aestivum
Traes_1BS_5963FC5FC 10.0kb downstream 10.0kb downstream 11879 true ta_iwgsc_1bs_v1_3461879: 1236-13114 Triticum aestivum
Traes_1BS_5963FC5FC 10.0kb downstream 10.0kb downstream 6376 false ta_iwgsc_1bs_v1_3461879: 6739-13114 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026345 5273 Angiosperm View MSA
124578068 5269 Grass View MSA
121345795 5274 Embryophyte View MSA
123425130 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain