Gene : Traes_1BS_06F3A2D5D T. aestivum v2.2
Defline:  (1 of 8) PTHR15371:SF2 - OUTER ENVELOPE PORE PROTEIN 16-1, CHLOROPLASTIC Genomic Order:  1
Name:  ? Traes_1BS_06F3A2D5D Secondary Identifier:  ? PAC:31908758
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_1BS_06F3A2D5D 0.5kb upstream 0.5kb upstream 2587 true ta_iwgsc_1bs_v1_3455785: 2612-5198 Triticum aestivum
Traes_1BS_06F3A2D5D 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_1bs_v1_3455785: 2612-3111 Triticum aestivum
Traes_1BS_06F3A2D5D 0.5kb downstream 0.5kb downstream 2587 true ta_iwgsc_1bs_v1_3455785: 3112-5698 Triticum aestivum
Traes_1BS_06F3A2D5D 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_1bs_v1_3455785: 5199-5698 Triticum aestivum
Traes_1BS_06F3A2D5D 1.0kb upstream 1.0kb upstream 3087 true ta_iwgsc_1bs_v1_3455785: 2112-5198 Triticum aestivum
Traes_1BS_06F3A2D5D 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_1bs_v1_3455785: 2112-3111 Triticum aestivum
Traes_1BS_06F3A2D5D 1.0kb downstream 1.0kb downstream 3087 true ta_iwgsc_1bs_v1_3455785: 3112-6198 Triticum aestivum
Traes_1BS_06F3A2D5D 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_1bs_v1_3455785: 5199-6198 Triticum aestivum
Traes_1BS_06F3A2D5D 2.0kb upstream 2.0kb upstream 4087 true ta_iwgsc_1bs_v1_3455785: 1112-5198 Triticum aestivum
Traes_1BS_06F3A2D5D 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_1bs_v1_3455785: 1112-3111 Triticum aestivum
Traes_1BS_06F3A2D5D 2.0kb downstream 2.0kb downstream 4087 true ta_iwgsc_1bs_v1_3455785: 3112-7198 Triticum aestivum
Traes_1BS_06F3A2D5D 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_1bs_v1_3455785: 5199-7198 Triticum aestivum
Traes_1BS_06F3A2D5D 5.0kb upstream 5.0kb upstream 5198 true ta_iwgsc_1bs_v1_3455785: 1-5198 Triticum aestivum
Traes_1BS_06F3A2D5D 5.0kb upstream 5.0kb upstream 3111 false ta_iwgsc_1bs_v1_3455785: 1-3111 Triticum aestivum
Traes_1BS_06F3A2D5D 5.0kb downstream 5.0kb downstream 7087 true ta_iwgsc_1bs_v1_3455785: 3112-10198 Triticum aestivum
Traes_1BS_06F3A2D5D 5.0kb downstream 5.0kb downstream 5000 false ta_iwgsc_1bs_v1_3455785: 5199-10198 Triticum aestivum
Traes_1BS_06F3A2D5D 10.0kb upstream 10.0kb upstream 5198 true ta_iwgsc_1bs_v1_3455785: 1-5198 Triticum aestivum
Traes_1BS_06F3A2D5D 10.0kb upstream 10.0kb upstream 3111 false ta_iwgsc_1bs_v1_3455785: 1-3111 Triticum aestivum
Traes_1BS_06F3A2D5D 10.0kb downstream 10.0kb downstream 7958 true ta_iwgsc_1bs_v1_3455785: 3112-11069 Triticum aestivum
Traes_1BS_06F3A2D5D 10.0kb downstream 10.0kb downstream 5871 false ta_iwgsc_1bs_v1_3455785: 5199-11069 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577178 5269 Grass View MSA
122042494 5273 Angiosperm View MSA
121351081 5274 Embryophyte View MSA
123382000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain