Gene : Traes_1DL_3DE7327BB T. aestivum v2.2
Defline:  (1 of 3) PTHR31332:SF0 - 7-HYDROXYMETHYL CHLOROPHYLL A REDUCTASE, CHLOROPLASTIC Genomic Order:  1
Name:  ? Traes_1DL_3DE7327BB Secondary Identifier:  ? PAC:31990176
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Taestivum PWY-5068 Triticum aestivum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_1DL_3DE7327BB 0.5kb upstream 0.5kb upstream 4173 true ta_iwgsc_1dl_v1_2242099: 2539-6711 Triticum aestivum
Traes_1DL_3DE7327BB 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_1dl_v1_2242099: 2539-3038 Triticum aestivum
Traes_1DL_3DE7327BB 0.5kb downstream 0.5kb downstream 4173 true ta_iwgsc_1dl_v1_2242099: 3039-7211 Triticum aestivum
Traes_1DL_3DE7327BB 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_1dl_v1_2242099: 6712-7211 Triticum aestivum
Traes_1DL_3DE7327BB 1.0kb upstream 1.0kb upstream 4673 true ta_iwgsc_1dl_v1_2242099: 2039-6711 Triticum aestivum
Traes_1DL_3DE7327BB 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_1dl_v1_2242099: 2039-3038 Triticum aestivum
Traes_1DL_3DE7327BB 1.0kb downstream 1.0kb downstream 4673 true ta_iwgsc_1dl_v1_2242099: 3039-7711 Triticum aestivum
Traes_1DL_3DE7327BB 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_1dl_v1_2242099: 6712-7711 Triticum aestivum
Traes_1DL_3DE7327BB 2.0kb upstream 2.0kb upstream 5673 true ta_iwgsc_1dl_v1_2242099: 1039-6711 Triticum aestivum
Traes_1DL_3DE7327BB 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_1dl_v1_2242099: 1039-3038 Triticum aestivum
Traes_1DL_3DE7327BB 2.0kb downstream 2.0kb downstream 5673 true ta_iwgsc_1dl_v1_2242099: 3039-8711 Triticum aestivum
Traes_1DL_3DE7327BB 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_1dl_v1_2242099: 6712-8711 Triticum aestivum
Traes_1DL_3DE7327BB 5.0kb upstream 5.0kb upstream 6711 true ta_iwgsc_1dl_v1_2242099: 1-6711 Triticum aestivum
Traes_1DL_3DE7327BB 5.0kb upstream 5.0kb upstream 3038 false ta_iwgsc_1dl_v1_2242099: 1-3038 Triticum aestivum
Traes_1DL_3DE7327BB 5.0kb downstream 5.0kb downstream 6884 true ta_iwgsc_1dl_v1_2242099: 3039-9922 Triticum aestivum
Traes_1DL_3DE7327BB 5.0kb downstream 5.0kb downstream 3211 false ta_iwgsc_1dl_v1_2242099: 6712-9922 Triticum aestivum
Traes_1DL_3DE7327BB 10.0kb upstream 10.0kb upstream 6711 true ta_iwgsc_1dl_v1_2242099: 1-6711 Triticum aestivum
Traes_1DL_3DE7327BB 10.0kb upstream 10.0kb upstream 3038 false ta_iwgsc_1dl_v1_2242099: 1-3038 Triticum aestivum
Traes_1DL_3DE7327BB 10.0kb downstream 10.0kb downstream 6884 true ta_iwgsc_1dl_v1_2242099: 3039-9922 Triticum aestivum
Traes_1DL_3DE7327BB 10.0kb downstream 10.0kb downstream 3211 false ta_iwgsc_1dl_v1_2242099: 6712-9922 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582983 5269 Grass View MSA
122042244 5273 Angiosperm View MSA
121347616 5274 Embryophyte View MSA
123428400 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain