Gene : Traes_2AL_549D005B7 T. aestivum v2.2
Defline:  (1 of 4) PTHR11476:SF7 - HISTIDYL-TRNA SYNTHETASE, ISOFORM D Genomic Order:  1
Name:  ? Traes_2AL_549D005B7 Secondary Identifier:  ? PAC:31857177
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Taestivum TRNA-CHARGING-PWY Triticum aestivum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_2AL_549D005B7 0.5kb upstream 0.5kb upstream 2901 true ta_iwgsc_2al_v1_6321746: 967-3867 Triticum aestivum
Traes_2AL_549D005B7 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_2al_v1_6321746: 967-1466 Triticum aestivum
Traes_2AL_549D005B7 0.5kb downstream 0.5kb downstream 2901 true ta_iwgsc_2al_v1_6321746: 1467-4367 Triticum aestivum
Traes_2AL_549D005B7 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_2al_v1_6321746: 3868-4367 Triticum aestivum
Traes_2AL_549D005B7 1.0kb upstream 1.0kb upstream 3401 true ta_iwgsc_2al_v1_6321746: 467-3867 Triticum aestivum
Traes_2AL_549D005B7 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_2al_v1_6321746: 467-1466 Triticum aestivum
Traes_2AL_549D005B7 1.0kb downstream 1.0kb downstream 3401 true ta_iwgsc_2al_v1_6321746: 1467-4867 Triticum aestivum
Traes_2AL_549D005B7 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_2al_v1_6321746: 3868-4867 Triticum aestivum
Traes_2AL_549D005B7 2.0kb upstream 2.0kb upstream 3867 true ta_iwgsc_2al_v1_6321746: 1-3867 Triticum aestivum
Traes_2AL_549D005B7 2.0kb upstream 2.0kb upstream 1466 false ta_iwgsc_2al_v1_6321746: 1-1466 Triticum aestivum
Traes_2AL_549D005B7 2.0kb downstream 2.0kb downstream 3946 true ta_iwgsc_2al_v1_6321746: 1467-5412 Triticum aestivum
Traes_2AL_549D005B7 2.0kb downstream 2.0kb downstream 1545 false ta_iwgsc_2al_v1_6321746: 3868-5412 Triticum aestivum
Traes_2AL_549D005B7 5.0kb upstream 5.0kb upstream 3867 true ta_iwgsc_2al_v1_6321746: 1-3867 Triticum aestivum
Traes_2AL_549D005B7 5.0kb upstream 5.0kb upstream 1466 false ta_iwgsc_2al_v1_6321746: 1-1466 Triticum aestivum
Traes_2AL_549D005B7 5.0kb downstream 5.0kb downstream 3946 true ta_iwgsc_2al_v1_6321746: 1467-5412 Triticum aestivum
Traes_2AL_549D005B7 5.0kb downstream 5.0kb downstream 1545 false ta_iwgsc_2al_v1_6321746: 3868-5412 Triticum aestivum
Traes_2AL_549D005B7 10.0kb upstream 10.0kb upstream 3867 true ta_iwgsc_2al_v1_6321746: 1-3867 Triticum aestivum
Traes_2AL_549D005B7 10.0kb upstream 10.0kb upstream 1466 false ta_iwgsc_2al_v1_6321746: 1-1466 Triticum aestivum
Traes_2AL_549D005B7 10.0kb downstream 10.0kb downstream 3946 true ta_iwgsc_2al_v1_6321746: 1467-5412 Triticum aestivum
Traes_2AL_549D005B7 10.0kb downstream 10.0kb downstream 1545 false ta_iwgsc_2al_v1_6321746: 3868-5412 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121938953 5273 Angiosperm Singleton cluster - no MSA
124512392 5269 Grass Singleton cluster - no MSA
121209446 5274 Embryophyte Singleton cluster - no MSA
123248259 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain