Gene : Traes_2AL_1AD2DDF83 T. aestivum v2.2
Defline:  (1 of 3) PTHR10742:SF229 - PROTOPORPHYRINOGEN OXIDASE 2, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  2
Name:  ? Traes_2AL_1AD2DDF83 Secondary Identifier:  ? PAC:31805198
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Taestivum CHLOROPHYLL-SYN Triticum aestivum pathologic  
Taestivum HEME-BIOSYNTHESIS-II Triticum aestivum pathologic  
Taestivum PWY-5918 Triticum aestivum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_2AL_1AD2DDF83 0.5kb upstream 0.5kb upstream 7828 true ta_iwgsc_2al_v1_6384943: 4089-11916 Triticum aestivum
Traes_2AL_1AD2DDF83 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_2al_v1_6384943: 4089-4588 Triticum aestivum
Traes_2AL_1AD2DDF83 0.5kb downstream 0.5kb downstream 7828 true ta_iwgsc_2al_v1_6384943: 4589-12416 Triticum aestivum
Traes_2AL_1AD2DDF83 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_2al_v1_6384943: 11917-12416 Triticum aestivum
Traes_2AL_1AD2DDF83 1.0kb upstream 1.0kb upstream 8328 true ta_iwgsc_2al_v1_6384943: 3589-11916 Triticum aestivum
Traes_2AL_1AD2DDF83 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_2al_v1_6384943: 3589-4588 Triticum aestivum
Traes_2AL_1AD2DDF83 1.0kb downstream 1.0kb downstream 8328 true ta_iwgsc_2al_v1_6384943: 4589-12916 Triticum aestivum
Traes_2AL_1AD2DDF83 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_2al_v1_6384943: 11917-12916 Triticum aestivum
Traes_2AL_1AD2DDF83 2.0kb upstream 2.0kb upstream 9328 true ta_iwgsc_2al_v1_6384943: 2589-11916 Triticum aestivum
Traes_2AL_1AD2DDF83 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_2al_v1_6384943: 2589-4588 Triticum aestivum
Traes_2AL_1AD2DDF83 2.0kb downstream 2.0kb downstream 9328 true ta_iwgsc_2al_v1_6384943: 4589-13916 Triticum aestivum
Traes_2AL_1AD2DDF83 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_2al_v1_6384943: 11917-13916 Triticum aestivum
Traes_2AL_1AD2DDF83 5.0kb upstream 5.0kb upstream 11916 true ta_iwgsc_2al_v1_6384943: 1-11916 Triticum aestivum
Traes_2AL_1AD2DDF83 5.0kb upstream 5.0kb upstream 4588 false ta_iwgsc_2al_v1_6384943: 1-4588 Triticum aestivum
Traes_2AL_1AD2DDF83 5.0kb downstream 5.0kb downstream 12328 true ta_iwgsc_2al_v1_6384943: 4589-16916 Triticum aestivum
Traes_2AL_1AD2DDF83 5.0kb downstream 5.0kb downstream 5000 false ta_iwgsc_2al_v1_6384943: 11917-16916 Triticum aestivum
Traes_2AL_1AD2DDF83 10.0kb upstream 10.0kb upstream 11916 true ta_iwgsc_2al_v1_6384943: 1-11916 Triticum aestivum
Traes_2AL_1AD2DDF83 10.0kb upstream 10.0kb upstream 4588 false ta_iwgsc_2al_v1_6384943: 1-4588 Triticum aestivum
Traes_2AL_1AD2DDF83 10.0kb downstream 10.0kb downstream 16813 true ta_iwgsc_2al_v1_6384943: 4589-21401 Triticum aestivum
Traes_2AL_1AD2DDF83 10.0kb downstream 10.0kb downstream 9485 false ta_iwgsc_2al_v1_6384943: 11917-21401 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571496 5269 Grass View MSA
122041725 5273 Angiosperm View MSA
121347394 5274 Embryophyte View MSA
123424000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain