Gene : Traes_2AS_3953901E4 T. aestivum v2.2
Defline:  (1 of 17) PF12338 - Ribulose-1,5-bisphosphate carboxylase small subunit (RbcS) Genomic Order:  1
Name:  ? Traes_2AS_3953901E4 Secondary Identifier:  ? PAC:31875823
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Taestivum CALVIN-PWY Triticum aestivum pathologic  
Taestivum PHOTOALL-PWY Triticum aestivum pathologic  
Taestivum PWY-5723 Triticum aestivum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_2AS_3953901E4 0.5kb upstream 0.5kb upstream 1951 true ta_iwgsc_2as_v1_5235651: 1500-3450 Triticum aestivum
Traes_2AS_3953901E4 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_2as_v1_5235651: 1500-1999 Triticum aestivum
Traes_2AS_3953901E4 0.5kb downstream 0.5kb downstream 1951 true ta_iwgsc_2as_v1_5235651: 2000-3950 Triticum aestivum
Traes_2AS_3953901E4 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_2as_v1_5235651: 3451-3950 Triticum aestivum
Traes_2AS_3953901E4 1.0kb upstream 1.0kb upstream 2451 true ta_iwgsc_2as_v1_5235651: 1000-3450 Triticum aestivum
Traes_2AS_3953901E4 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_2as_v1_5235651: 1000-1999 Triticum aestivum
Traes_2AS_3953901E4 1.0kb downstream 1.0kb downstream 2451 true ta_iwgsc_2as_v1_5235651: 2000-4450 Triticum aestivum
Traes_2AS_3953901E4 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_2as_v1_5235651: 3451-4450 Triticum aestivum
Traes_2AS_3953901E4 2.0kb upstream 2.0kb upstream 3450 true ta_iwgsc_2as_v1_5235651: 1-3450 Triticum aestivum
Traes_2AS_3953901E4 2.0kb upstream 2.0kb upstream 1999 false ta_iwgsc_2as_v1_5235651: 1-1999 Triticum aestivum
Traes_2AS_3953901E4 2.0kb downstream 2.0kb downstream 2998 true ta_iwgsc_2as_v1_5235651: 2000-4997 Triticum aestivum
Traes_2AS_3953901E4 2.0kb downstream 2.0kb downstream 1547 false ta_iwgsc_2as_v1_5235651: 3451-4997 Triticum aestivum
Traes_2AS_3953901E4 5.0kb upstream 5.0kb upstream 3450 true ta_iwgsc_2as_v1_5235651: 1-3450 Triticum aestivum
Traes_2AS_3953901E4 5.0kb upstream 5.0kb upstream 1999 false ta_iwgsc_2as_v1_5235651: 1-1999 Triticum aestivum
Traes_2AS_3953901E4 5.0kb downstream 5.0kb downstream 2998 true ta_iwgsc_2as_v1_5235651: 2000-4997 Triticum aestivum
Traes_2AS_3953901E4 5.0kb downstream 5.0kb downstream 1547 false ta_iwgsc_2as_v1_5235651: 3451-4997 Triticum aestivum
Traes_2AS_3953901E4 10.0kb upstream 10.0kb upstream 3450 true ta_iwgsc_2as_v1_5235651: 1-3450 Triticum aestivum
Traes_2AS_3953901E4 10.0kb upstream 10.0kb upstream 1999 false ta_iwgsc_2as_v1_5235651: 1-1999 Triticum aestivum
Traes_2AS_3953901E4 10.0kb downstream 10.0kb downstream 2998 true ta_iwgsc_2as_v1_5235651: 2000-4997 Triticum aestivum
Traes_2AS_3953901E4 10.0kb downstream 10.0kb downstream 1547 false ta_iwgsc_2as_v1_5235651: 3451-4997 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124590513 5269 Grass View MSA
122046951 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain