Gene : Traes_2BL_5877DD83D T. aestivum v2.2
Defline:  (1 of 20) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  1
Name:  ? Traes_2BL_5877DD83D Secondary Identifier:  ? PAC:31801517
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_2BL_5877DD83D 0.5kb upstream 0.5kb upstream 1354 true ta_iwgsc_2bl_v1_7998587: 207-1560 Triticum aestivum
Traes_2BL_5877DD83D 0.5kb upstream 0.5kb upstream 151 false ta_iwgsc_2bl_v1_7998587: 1410-1560 Triticum aestivum
Traes_2BL_5877DD83D 0.5kb downstream 0.5kb downstream 1409 true ta_iwgsc_2bl_v1_7998587: 1-1409 Triticum aestivum
Traes_2BL_5877DD83D 0.5kb downstream 0.5kb downstream 206 false ta_iwgsc_2bl_v1_7998587: 1-206 Triticum aestivum
Traes_2BL_5877DD83D 1.0kb upstream 1.0kb upstream 1354 true ta_iwgsc_2bl_v1_7998587: 207-1560 Triticum aestivum
Traes_2BL_5877DD83D 1.0kb upstream 1.0kb upstream 151 false ta_iwgsc_2bl_v1_7998587: 1410-1560 Triticum aestivum
Traes_2BL_5877DD83D 1.0kb downstream 1.0kb downstream 1409 true ta_iwgsc_2bl_v1_7998587: 1-1409 Triticum aestivum
Traes_2BL_5877DD83D 1.0kb downstream 1.0kb downstream 206 false ta_iwgsc_2bl_v1_7998587: 1-206 Triticum aestivum
Traes_2BL_5877DD83D 2.0kb upstream 2.0kb upstream 1354 true ta_iwgsc_2bl_v1_7998587: 207-1560 Triticum aestivum
Traes_2BL_5877DD83D 2.0kb upstream 2.0kb upstream 151 false ta_iwgsc_2bl_v1_7998587: 1410-1560 Triticum aestivum
Traes_2BL_5877DD83D 2.0kb downstream 2.0kb downstream 1409 true ta_iwgsc_2bl_v1_7998587: 1-1409 Triticum aestivum
Traes_2BL_5877DD83D 2.0kb downstream 2.0kb downstream 206 false ta_iwgsc_2bl_v1_7998587: 1-206 Triticum aestivum
Traes_2BL_5877DD83D 5.0kb upstream 5.0kb upstream 1354 true ta_iwgsc_2bl_v1_7998587: 207-1560 Triticum aestivum
Traes_2BL_5877DD83D 5.0kb upstream 5.0kb upstream 151 false ta_iwgsc_2bl_v1_7998587: 1410-1560 Triticum aestivum
Traes_2BL_5877DD83D 5.0kb downstream 5.0kb downstream 1409 true ta_iwgsc_2bl_v1_7998587: 1-1409 Triticum aestivum
Traes_2BL_5877DD83D 5.0kb downstream 5.0kb downstream 206 false ta_iwgsc_2bl_v1_7998587: 1-206 Triticum aestivum
Traes_2BL_5877DD83D 10.0kb upstream 10.0kb upstream 1354 true ta_iwgsc_2bl_v1_7998587: 207-1560 Triticum aestivum
Traes_2BL_5877DD83D 10.0kb upstream 10.0kb upstream 151 false ta_iwgsc_2bl_v1_7998587: 1410-1560 Triticum aestivum
Traes_2BL_5877DD83D 10.0kb downstream 10.0kb downstream 1409 true ta_iwgsc_2bl_v1_7998587: 1-1409 Triticum aestivum
Traes_2BL_5877DD83D 10.0kb downstream 10.0kb downstream 206 false ta_iwgsc_2bl_v1_7998587: 1-206 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573617 5269 Grass View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain