Gene : Traes_2BL_F49E62B6E T. aestivum v2.2
Defline:  (1 of 3) PTHR23160:SF3 - SYNAPTONEMAL COMPLEX PROTEIN 1-RELATED Genomic Order:  1
Name:  ? Traes_2BL_F49E62B6E Secondary Identifier:  ? PAC:31839198
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_2BL_F49E62B6E 0.5kb upstream 0.5kb upstream 9833 true ta_iwgsc_2bl_v1_8085841: 4645-14477 Triticum aestivum
Traes_2BL_F49E62B6E 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_2bl_v1_8085841: 4645-5144 Triticum aestivum
Traes_2BL_F49E62B6E 0.5kb downstream 0.5kb downstream 9833 true ta_iwgsc_2bl_v1_8085841: 5145-14977 Triticum aestivum
Traes_2BL_F49E62B6E 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_2bl_v1_8085841: 14478-14977 Triticum aestivum
Traes_2BL_F49E62B6E 1.0kb upstream 1.0kb upstream 10333 true ta_iwgsc_2bl_v1_8085841: 4145-14477 Triticum aestivum
Traes_2BL_F49E62B6E 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_2bl_v1_8085841: 4145-5144 Triticum aestivum
Traes_2BL_F49E62B6E 1.0kb downstream 1.0kb downstream 10333 true ta_iwgsc_2bl_v1_8085841: 5145-15477 Triticum aestivum
Traes_2BL_F49E62B6E 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_2bl_v1_8085841: 14478-15477 Triticum aestivum
Traes_2BL_F49E62B6E 2.0kb upstream 2.0kb upstream 11333 true ta_iwgsc_2bl_v1_8085841: 3145-14477 Triticum aestivum
Traes_2BL_F49E62B6E 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_2bl_v1_8085841: 3145-5144 Triticum aestivum
Traes_2BL_F49E62B6E 2.0kb downstream 2.0kb downstream 11240 true ta_iwgsc_2bl_v1_8085841: 5145-16384 Triticum aestivum
Traes_2BL_F49E62B6E 2.0kb downstream 2.0kb downstream 1907 false ta_iwgsc_2bl_v1_8085841: 14478-16384 Triticum aestivum
Traes_2BL_F49E62B6E 5.0kb upstream 5.0kb upstream 14333 true ta_iwgsc_2bl_v1_8085841: 145-14477 Triticum aestivum
Traes_2BL_F49E62B6E 5.0kb upstream 5.0kb upstream 5000 false ta_iwgsc_2bl_v1_8085841: 145-5144 Triticum aestivum
Traes_2BL_F49E62B6E 5.0kb downstream 5.0kb downstream 11240 true ta_iwgsc_2bl_v1_8085841: 5145-16384 Triticum aestivum
Traes_2BL_F49E62B6E 5.0kb downstream 5.0kb downstream 1907 false ta_iwgsc_2bl_v1_8085841: 14478-16384 Triticum aestivum
Traes_2BL_F49E62B6E 10.0kb upstream 10.0kb upstream 14477 true ta_iwgsc_2bl_v1_8085841: 1-14477 Triticum aestivum
Traes_2BL_F49E62B6E 10.0kb upstream 10.0kb upstream 5144 false ta_iwgsc_2bl_v1_8085841: 1-5144 Triticum aestivum
Traes_2BL_F49E62B6E 10.0kb downstream 10.0kb downstream 11240 true ta_iwgsc_2bl_v1_8085841: 5145-16384 Triticum aestivum
Traes_2BL_F49E62B6E 10.0kb downstream 10.0kb downstream 1907 false ta_iwgsc_2bl_v1_8085841: 14478-16384 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580617 5269 Grass View MSA
122042808 5273 Angiosperm View MSA
121349481 5274 Embryophyte View MSA
123381327 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain