Gene : Traes_3AL_834004A48 T. aestivum v2.2
Defline:  (1 of 2) PTHR13789:SF207 - LYCOPENE EPSILON CYCLASE, CHLOROPLASTIC Genomic Order:  1
Name:  ? Traes_3AL_834004A48 Secondary Identifier:  ? PAC:32004449
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Taestivum CAROTENOID-PWY Triticum aestivum pathologic  
Taestivum PWY-5175 Triticum aestivum pathologic  
Taestivum PWY-5946 Triticum aestivum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_3AL_834004A48 0.5kb upstream 0.5kb upstream 3371 true ta_iwgsc_3al_v1_4436448: 27-3397 Triticum aestivum
Traes_3AL_834004A48 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_3al_v1_4436448: 2898-3397 Triticum aestivum
Traes_3AL_834004A48 0.5kb downstream 0.5kb downstream 2897 true ta_iwgsc_3al_v1_4436448: 1-2897 Triticum aestivum
Traes_3AL_834004A48 0.5kb downstream 0.5kb downstream 26 false ta_iwgsc_3al_v1_4436448: 1-26 Triticum aestivum
Traes_3AL_834004A48 1.0kb upstream 1.0kb upstream 3460 true ta_iwgsc_3al_v1_4436448: 27-3486 Triticum aestivum
Traes_3AL_834004A48 1.0kb upstream 1.0kb upstream 589 false ta_iwgsc_3al_v1_4436448: 2898-3486 Triticum aestivum
Traes_3AL_834004A48 1.0kb downstream 1.0kb downstream 2897 true ta_iwgsc_3al_v1_4436448: 1-2897 Triticum aestivum
Traes_3AL_834004A48 1.0kb downstream 1.0kb downstream 26 false ta_iwgsc_3al_v1_4436448: 1-26 Triticum aestivum
Traes_3AL_834004A48 2.0kb upstream 2.0kb upstream 3460 true ta_iwgsc_3al_v1_4436448: 27-3486 Triticum aestivum
Traes_3AL_834004A48 2.0kb upstream 2.0kb upstream 589 false ta_iwgsc_3al_v1_4436448: 2898-3486 Triticum aestivum
Traes_3AL_834004A48 2.0kb downstream 2.0kb downstream 2897 true ta_iwgsc_3al_v1_4436448: 1-2897 Triticum aestivum
Traes_3AL_834004A48 2.0kb downstream 2.0kb downstream 26 false ta_iwgsc_3al_v1_4436448: 1-26 Triticum aestivum
Traes_3AL_834004A48 5.0kb upstream 5.0kb upstream 3460 true ta_iwgsc_3al_v1_4436448: 27-3486 Triticum aestivum
Traes_3AL_834004A48 5.0kb upstream 5.0kb upstream 589 false ta_iwgsc_3al_v1_4436448: 2898-3486 Triticum aestivum
Traes_3AL_834004A48 5.0kb downstream 5.0kb downstream 2897 true ta_iwgsc_3al_v1_4436448: 1-2897 Triticum aestivum
Traes_3AL_834004A48 5.0kb downstream 5.0kb downstream 26 false ta_iwgsc_3al_v1_4436448: 1-26 Triticum aestivum
Traes_3AL_834004A48 10.0kb upstream 10.0kb upstream 3460 true ta_iwgsc_3al_v1_4436448: 27-3486 Triticum aestivum
Traes_3AL_834004A48 10.0kb upstream 10.0kb upstream 589 false ta_iwgsc_3al_v1_4436448: 2898-3486 Triticum aestivum
Traes_3AL_834004A48 10.0kb downstream 10.0kb downstream 2897 true ta_iwgsc_3al_v1_4436448: 1-2897 Triticum aestivum
Traes_3AL_834004A48 10.0kb downstream 10.0kb downstream 26 false ta_iwgsc_3al_v1_4436448: 1-26 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579476 5269 Grass View MSA
122046204 5273 Angiosperm View MSA
121345644 5274 Embryophyte View MSA
123423874 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain