Gene : Traes_3B_17608EBB3 T. aestivum v2.2
Defline:  (1 of 1) KOG1048 - Neural adherens junction protein Plakophilin and related Armadillo repeat proteins Genomic Order:  1
Name:  ? Traes_3B_17608EBB3 Secondary Identifier:  ? PAC:31760590
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Taestivum PWY-7511 Triticum aestivum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_3B_17608EBB3 0.5kb upstream 0.5kb upstream 6851 true ta_iwgsc_3b_v1_10501613: 13582-20432 Triticum aestivum
Traes_3B_17608EBB3 0.5kb upstream 0.5kb upstream 1 false ta_iwgsc_3b_v1_10501613: 20432-20432 Triticum aestivum
Traes_3B_17608EBB3 0.5kb downstream 0.5kb downstream 7350 true ta_iwgsc_3b_v1_10501613: 13082-20431 Triticum aestivum
Traes_3B_17608EBB3 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_3b_v1_10501613: 13082-13581 Triticum aestivum
Traes_3B_17608EBB3 1.0kb upstream 1.0kb upstream 6851 true ta_iwgsc_3b_v1_10501613: 13582-20432 Triticum aestivum
Traes_3B_17608EBB3 1.0kb upstream 1.0kb upstream 1 false ta_iwgsc_3b_v1_10501613: 20432-20432 Triticum aestivum
Traes_3B_17608EBB3 1.0kb downstream 1.0kb downstream 7850 true ta_iwgsc_3b_v1_10501613: 12582-20431 Triticum aestivum
Traes_3B_17608EBB3 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_3b_v1_10501613: 12582-13581 Triticum aestivum
Traes_3B_17608EBB3 2.0kb upstream 2.0kb upstream 6851 true ta_iwgsc_3b_v1_10501613: 13582-20432 Triticum aestivum
Traes_3B_17608EBB3 2.0kb upstream 2.0kb upstream 1 false ta_iwgsc_3b_v1_10501613: 20432-20432 Triticum aestivum
Traes_3B_17608EBB3 2.0kb downstream 2.0kb downstream 8850 true ta_iwgsc_3b_v1_10501613: 11582-20431 Triticum aestivum
Traes_3B_17608EBB3 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_3b_v1_10501613: 11582-13581 Triticum aestivum
Traes_3B_17608EBB3 5.0kb upstream 5.0kb upstream 6851 true ta_iwgsc_3b_v1_10501613: 13582-20432 Triticum aestivum
Traes_3B_17608EBB3 5.0kb upstream 5.0kb upstream 1 false ta_iwgsc_3b_v1_10501613: 20432-20432 Triticum aestivum
Traes_3B_17608EBB3 5.0kb downstream 5.0kb downstream 11850 true ta_iwgsc_3b_v1_10501613: 8582-20431 Triticum aestivum
Traes_3B_17608EBB3 5.0kb downstream 5.0kb downstream 5000 false ta_iwgsc_3b_v1_10501613: 8582-13581 Triticum aestivum
Traes_3B_17608EBB3 10.0kb upstream 10.0kb upstream 6851 true ta_iwgsc_3b_v1_10501613: 13582-20432 Triticum aestivum
Traes_3B_17608EBB3 10.0kb upstream 10.0kb upstream 1 false ta_iwgsc_3b_v1_10501613: 20432-20432 Triticum aestivum
Traes_3B_17608EBB3 10.0kb downstream 10.0kb downstream 16850 true ta_iwgsc_3b_v1_10501613: 3582-20431 Triticum aestivum
Traes_3B_17608EBB3 10.0kb downstream 10.0kb downstream 10000 false ta_iwgsc_3b_v1_10501613: 3582-13581 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571752 5269 Grass View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain