Gene : Traes_3B_03F5B517D T. aestivum v2.2
Defline:  (1 of 2) PTHR12499//PTHR12499:SF3 - OPTIC ATROPHY 3 PROTEIN OPA3 Genomic Order:  2
Name:  ? Traes_3B_03F5B517D Secondary Identifier:  ? PAC:31916315
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_3B_03F5B517D 0.5kb upstream 0.5kb upstream 6198 true ta_iwgsc_3b_v1_10568814: 1969-8166 Triticum aestivum
Traes_3B_03F5B517D 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_3b_v1_10568814: 7667-8166 Triticum aestivum
Traes_3B_03F5B517D 0.5kb downstream 0.5kb downstream 6198 true ta_iwgsc_3b_v1_10568814: 1469-7666 Triticum aestivum
Traes_3B_03F5B517D 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_3b_v1_10568814: 1469-1968 Triticum aestivum
Traes_3B_03F5B517D 1.0kb upstream 1.0kb upstream 6698 true ta_iwgsc_3b_v1_10568814: 1969-8666 Triticum aestivum
Traes_3B_03F5B517D 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_3b_v1_10568814: 7667-8666 Triticum aestivum
Traes_3B_03F5B517D 1.0kb downstream 1.0kb downstream 6698 true ta_iwgsc_3b_v1_10568814: 969-7666 Triticum aestivum
Traes_3B_03F5B517D 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_3b_v1_10568814: 969-1968 Triticum aestivum
Traes_3B_03F5B517D 2.0kb upstream 2.0kb upstream 7698 true ta_iwgsc_3b_v1_10568814: 1969-9666 Triticum aestivum
Traes_3B_03F5B517D 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_3b_v1_10568814: 7667-9666 Triticum aestivum
Traes_3B_03F5B517D 2.0kb downstream 2.0kb downstream 7666 true ta_iwgsc_3b_v1_10568814: 1-7666 Triticum aestivum
Traes_3B_03F5B517D 2.0kb downstream 2.0kb downstream 1968 false ta_iwgsc_3b_v1_10568814: 1-1968 Triticum aestivum
Traes_3B_03F5B517D 5.0kb upstream 5.0kb upstream 10698 true ta_iwgsc_3b_v1_10568814: 1969-12666 Triticum aestivum
Traes_3B_03F5B517D 5.0kb upstream 5.0kb upstream 5000 false ta_iwgsc_3b_v1_10568814: 7667-12666 Triticum aestivum
Traes_3B_03F5B517D 5.0kb downstream 5.0kb downstream 7666 true ta_iwgsc_3b_v1_10568814: 1-7666 Triticum aestivum
Traes_3B_03F5B517D 5.0kb downstream 5.0kb downstream 1968 false ta_iwgsc_3b_v1_10568814: 1-1968 Triticum aestivum
Traes_3B_03F5B517D 10.0kb upstream 10.0kb upstream 13759 true ta_iwgsc_3b_v1_10568814: 1969-15727 Triticum aestivum
Traes_3B_03F5B517D 10.0kb upstream 10.0kb upstream 8061 false ta_iwgsc_3b_v1_10568814: 7667-15727 Triticum aestivum
Traes_3B_03F5B517D 10.0kb downstream 10.0kb downstream 7666 true ta_iwgsc_3b_v1_10568814: 1-7666 Triticum aestivum
Traes_3B_03F5B517D 10.0kb downstream 10.0kb downstream 1968 false ta_iwgsc_3b_v1_10568814: 1-1968 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570691 5269 Grass View MSA
122047456 5273 Angiosperm View MSA
121344261 5274 Embryophyte View MSA
123428065 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain