Gene : Traes_3B_E100908DB T. aestivum v2.2
Defline:  (1 of 7) PTHR15052:SF2 - GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 2 Genomic Order:  1
Name:  ? Traes_3B_E100908DB Secondary Identifier:  ? PAC:31786138
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_3B_E100908DB 0.5kb upstream 0.5kb upstream 6937 true ta_iwgsc_3b_v1_10592487: 1-6937 Triticum aestivum
Traes_3B_E100908DB 0.5kb upstream 0.5kb upstream 2 false ta_iwgsc_3b_v1_10592487: 1-2 Triticum aestivum
Traes_3B_E100908DB 0.5kb downstream 0.5kb downstream 7435 true ta_iwgsc_3b_v1_10592487: 3-7437 Triticum aestivum
Traes_3B_E100908DB 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_3b_v1_10592487: 6938-7437 Triticum aestivum
Traes_3B_E100908DB 1.0kb upstream 1.0kb upstream 6937 true ta_iwgsc_3b_v1_10592487: 1-6937 Triticum aestivum
Traes_3B_E100908DB 1.0kb upstream 1.0kb upstream 2 false ta_iwgsc_3b_v1_10592487: 1-2 Triticum aestivum
Traes_3B_E100908DB 1.0kb downstream 1.0kb downstream 7935 true ta_iwgsc_3b_v1_10592487: 3-7937 Triticum aestivum
Traes_3B_E100908DB 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_3b_v1_10592487: 6938-7937 Triticum aestivum
Traes_3B_E100908DB 2.0kb upstream 2.0kb upstream 6937 true ta_iwgsc_3b_v1_10592487: 1-6937 Triticum aestivum
Traes_3B_E100908DB 2.0kb upstream 2.0kb upstream 2 false ta_iwgsc_3b_v1_10592487: 1-2 Triticum aestivum
Traes_3B_E100908DB 2.0kb downstream 2.0kb downstream 8935 true ta_iwgsc_3b_v1_10592487: 3-8937 Triticum aestivum
Traes_3B_E100908DB 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_3b_v1_10592487: 6938-8937 Triticum aestivum
Traes_3B_E100908DB 5.0kb upstream 5.0kb upstream 6937 true ta_iwgsc_3b_v1_10592487: 1-6937 Triticum aestivum
Traes_3B_E100908DB 5.0kb upstream 5.0kb upstream 2 false ta_iwgsc_3b_v1_10592487: 1-2 Triticum aestivum
Traes_3B_E100908DB 5.0kb downstream 5.0kb downstream 11935 true ta_iwgsc_3b_v1_10592487: 3-11937 Triticum aestivum
Traes_3B_E100908DB 5.0kb downstream 5.0kb downstream 5000 false ta_iwgsc_3b_v1_10592487: 6938-11937 Triticum aestivum
Traes_3B_E100908DB 10.0kb upstream 10.0kb upstream 6937 true ta_iwgsc_3b_v1_10592487: 1-6937 Triticum aestivum
Traes_3B_E100908DB 10.0kb upstream 10.0kb upstream 2 false ta_iwgsc_3b_v1_10592487: 1-2 Triticum aestivum
Traes_3B_E100908DB 10.0kb downstream 10.0kb downstream 16935 true ta_iwgsc_3b_v1_10592487: 3-16937 Triticum aestivum
Traes_3B_E100908DB 10.0kb downstream 10.0kb downstream 10000 false ta_iwgsc_3b_v1_10592487: 6938-16937 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026858 5273 Angiosperm View MSA
124586125 5269 Grass View MSA
121347438 5274 Embryophyte View MSA
123380552 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain