Gene : Traes_3B_CBEACA073 T. aestivum v2.2
Defline:  (1 of 11) PF02900 - Catalytic LigB subunit of aromatic ring-opening dioxygenase (LigB) Genomic Order:  1
Name:  ? Traes_3B_CBEACA073 Secondary Identifier:  ? PAC:31827727
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_3B_CBEACA073 0.5kb upstream 0.5kb upstream 3871 true ta_iwgsc_3b_v1_10744855: 223-4093 Triticum aestivum
Traes_3B_CBEACA073 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_3b_v1_10744855: 3594-4093 Triticum aestivum
Traes_3B_CBEACA073 0.5kb downstream 0.5kb downstream 3593 true ta_iwgsc_3b_v1_10744855: 1-3593 Triticum aestivum
Traes_3B_CBEACA073 0.5kb downstream 0.5kb downstream 222 false ta_iwgsc_3b_v1_10744855: 1-222 Triticum aestivum
Traes_3B_CBEACA073 1.0kb upstream 1.0kb upstream 4371 true ta_iwgsc_3b_v1_10744855: 223-4593 Triticum aestivum
Traes_3B_CBEACA073 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_3b_v1_10744855: 3594-4593 Triticum aestivum
Traes_3B_CBEACA073 1.0kb downstream 1.0kb downstream 3593 true ta_iwgsc_3b_v1_10744855: 1-3593 Triticum aestivum
Traes_3B_CBEACA073 1.0kb downstream 1.0kb downstream 222 false ta_iwgsc_3b_v1_10744855: 1-222 Triticum aestivum
Traes_3B_CBEACA073 2.0kb upstream 2.0kb upstream 5371 true ta_iwgsc_3b_v1_10744855: 223-5593 Triticum aestivum
Traes_3B_CBEACA073 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_3b_v1_10744855: 3594-5593 Triticum aestivum
Traes_3B_CBEACA073 2.0kb downstream 2.0kb downstream 3593 true ta_iwgsc_3b_v1_10744855: 1-3593 Triticum aestivum
Traes_3B_CBEACA073 2.0kb downstream 2.0kb downstream 222 false ta_iwgsc_3b_v1_10744855: 1-222 Triticum aestivum
Traes_3B_CBEACA073 5.0kb upstream 5.0kb upstream 7063 true ta_iwgsc_3b_v1_10744855: 223-7285 Triticum aestivum
Traes_3B_CBEACA073 5.0kb upstream 5.0kb upstream 3692 false ta_iwgsc_3b_v1_10744855: 3594-7285 Triticum aestivum
Traes_3B_CBEACA073 5.0kb downstream 5.0kb downstream 3593 true ta_iwgsc_3b_v1_10744855: 1-3593 Triticum aestivum
Traes_3B_CBEACA073 5.0kb downstream 5.0kb downstream 222 false ta_iwgsc_3b_v1_10744855: 1-222 Triticum aestivum
Traes_3B_CBEACA073 10.0kb upstream 10.0kb upstream 7063 true ta_iwgsc_3b_v1_10744855: 223-7285 Triticum aestivum
Traes_3B_CBEACA073 10.0kb upstream 10.0kb upstream 3692 false ta_iwgsc_3b_v1_10744855: 3594-7285 Triticum aestivum
Traes_3B_CBEACA073 10.0kb downstream 10.0kb downstream 3593 true ta_iwgsc_3b_v1_10744855: 1-3593 Triticum aestivum
Traes_3B_CBEACA073 10.0kb downstream 10.0kb downstream 222 false ta_iwgsc_3b_v1_10744855: 1-222 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588785 5269 Grass View MSA
122046323 5273 Angiosperm View MSA
121350065 5274 Embryophyte View MSA
123426386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain