Gene : Traes_3B_A2A1E5CF0 T. aestivum v2.2
Defline:  (1 of 2) PF05553//PF14364 - Cotton fibre expressed protein (DUF761) // Domain of unknown function (DUF4408) (DUF4408) Genomic Order:  1
Name:  ? Traes_3B_A2A1E5CF0 Secondary Identifier:  ? PAC:31780537
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_3B_A2A1E5CF0 0.5kb upstream 0.5kb upstream 1761 true ta_iwgsc_3b_v1_10743455: 3555-5315 Triticum aestivum
Traes_3B_A2A1E5CF0 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_3b_v1_10743455: 4816-5315 Triticum aestivum
Traes_3B_A2A1E5CF0 0.5kb downstream 0.5kb downstream 1761 true ta_iwgsc_3b_v1_10743455: 3055-4815 Triticum aestivum
Traes_3B_A2A1E5CF0 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_3b_v1_10743455: 3055-3554 Triticum aestivum
Traes_3B_A2A1E5CF0 1.0kb upstream 1.0kb upstream 2261 true ta_iwgsc_3b_v1_10743455: 3555-5815 Triticum aestivum
Traes_3B_A2A1E5CF0 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_3b_v1_10743455: 4816-5815 Triticum aestivum
Traes_3B_A2A1E5CF0 1.0kb downstream 1.0kb downstream 2261 true ta_iwgsc_3b_v1_10743455: 2555-4815 Triticum aestivum
Traes_3B_A2A1E5CF0 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_3b_v1_10743455: 2555-3554 Triticum aestivum
Traes_3B_A2A1E5CF0 2.0kb upstream 2.0kb upstream 3261 true ta_iwgsc_3b_v1_10743455: 3555-6815 Triticum aestivum
Traes_3B_A2A1E5CF0 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_3b_v1_10743455: 4816-6815 Triticum aestivum
Traes_3B_A2A1E5CF0 2.0kb downstream 2.0kb downstream 3261 true ta_iwgsc_3b_v1_10743455: 1555-4815 Triticum aestivum
Traes_3B_A2A1E5CF0 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_3b_v1_10743455: 1555-3554 Triticum aestivum
Traes_3B_A2A1E5CF0 5.0kb upstream 5.0kb upstream 5066 true ta_iwgsc_3b_v1_10743455: 3555-8620 Triticum aestivum
Traes_3B_A2A1E5CF0 5.0kb upstream 5.0kb upstream 3805 false ta_iwgsc_3b_v1_10743455: 4816-8620 Triticum aestivum
Traes_3B_A2A1E5CF0 5.0kb downstream 5.0kb downstream 4815 true ta_iwgsc_3b_v1_10743455: 1-4815 Triticum aestivum
Traes_3B_A2A1E5CF0 5.0kb downstream 5.0kb downstream 3554 false ta_iwgsc_3b_v1_10743455: 1-3554 Triticum aestivum
Traes_3B_A2A1E5CF0 10.0kb upstream 10.0kb upstream 5066 true ta_iwgsc_3b_v1_10743455: 3555-8620 Triticum aestivum
Traes_3B_A2A1E5CF0 10.0kb upstream 10.0kb upstream 3805 false ta_iwgsc_3b_v1_10743455: 4816-8620 Triticum aestivum
Traes_3B_A2A1E5CF0 10.0kb downstream 10.0kb downstream 4815 true ta_iwgsc_3b_v1_10743455: 1-4815 Triticum aestivum
Traes_3B_A2A1E5CF0 10.0kb downstream 10.0kb downstream 3554 false ta_iwgsc_3b_v1_10743455: 1-3554 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576673 5269 Grass View MSA
122041618 5273 Angiosperm View MSA
121309871 5274 Embryophyte View MSA
123347511 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain