Gene : Traes_3DL_463803781 T. aestivum v2.2
Defline:  (1 of 35) PF00124 - Photosynthetic reaction centre protein (Photo_RC) Genomic Order:  3
Name:  ? Traes_3DL_463803781 Secondary Identifier:  ? PAC:31894887
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Taestivum PHOTOALL-PWY Triticum aestivum pathologic  
Taestivum PWY-101 Triticum aestivum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_3DL_463803781 0.5kb upstream 0.5kb upstream 1866 true ta_iwgsc_3dl_v1_6926939: 2450-4315 Triticum aestivum
Traes_3DL_463803781 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_3dl_v1_6926939: 3816-4315 Triticum aestivum
Traes_3DL_463803781 0.5kb downstream 0.5kb downstream 1866 true ta_iwgsc_3dl_v1_6926939: 1950-3815 Triticum aestivum
Traes_3DL_463803781 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_3dl_v1_6926939: 1950-2449 Triticum aestivum
Traes_3DL_463803781 1.0kb upstream 1.0kb upstream 2366 true ta_iwgsc_3dl_v1_6926939: 2450-4815 Triticum aestivum
Traes_3DL_463803781 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_3dl_v1_6926939: 3816-4815 Triticum aestivum
Traes_3DL_463803781 1.0kb downstream 1.0kb downstream 2366 true ta_iwgsc_3dl_v1_6926939: 1450-3815 Triticum aestivum
Traes_3DL_463803781 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_3dl_v1_6926939: 1450-2449 Triticum aestivum
Traes_3DL_463803781 2.0kb upstream 2.0kb upstream 3366 true ta_iwgsc_3dl_v1_6926939: 2450-5815 Triticum aestivum
Traes_3DL_463803781 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_3dl_v1_6926939: 3816-5815 Triticum aestivum
Traes_3DL_463803781 2.0kb downstream 2.0kb downstream 3366 true ta_iwgsc_3dl_v1_6926939: 450-3815 Triticum aestivum
Traes_3DL_463803781 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_3dl_v1_6926939: 450-2449 Triticum aestivum
Traes_3DL_463803781 5.0kb upstream 5.0kb upstream 4554 true ta_iwgsc_3dl_v1_6926939: 2450-7003 Triticum aestivum
Traes_3DL_463803781 5.0kb upstream 5.0kb upstream 3188 false ta_iwgsc_3dl_v1_6926939: 3816-7003 Triticum aestivum
Traes_3DL_463803781 5.0kb downstream 5.0kb downstream 3815 true ta_iwgsc_3dl_v1_6926939: 1-3815 Triticum aestivum
Traes_3DL_463803781 5.0kb downstream 5.0kb downstream 2449 false ta_iwgsc_3dl_v1_6926939: 1-2449 Triticum aestivum
Traes_3DL_463803781 10.0kb upstream 10.0kb upstream 4554 true ta_iwgsc_3dl_v1_6926939: 2450-7003 Triticum aestivum
Traes_3DL_463803781 10.0kb upstream 10.0kb upstream 3188 false ta_iwgsc_3dl_v1_6926939: 3816-7003 Triticum aestivum
Traes_3DL_463803781 10.0kb downstream 10.0kb downstream 3815 true ta_iwgsc_3dl_v1_6926939: 1-3815 Triticum aestivum
Traes_3DL_463803781 10.0kb downstream 10.0kb downstream 2449 false ta_iwgsc_3dl_v1_6926939: 1-2449 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121944380 5273 Angiosperm Singleton cluster - no MSA
124517819 5269 Grass Singleton cluster - no MSA
121214873 5274 Embryophyte Singleton cluster - no MSA
123253686 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain