Gene : Traes_3DS_88514D123 T. aestivum v2.2
Defline:  (1 of 4) PTHR22594:SF5 - ASPARTATE--TRNA LIGASE, MITOCHONDRIAL Genomic Order:  1
Name:  ? Traes_3DS_88514D123 Secondary Identifier:  ? PAC:31737909
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Taestivum TRNA-CHARGING-PWY Triticum aestivum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_3DS_88514D123 0.5kb upstream 0.5kb upstream 7674 true ta_iwgsc_3ds_v1_2599489: 1-7674 Triticum aestivum
Traes_3DS_88514D123 0.5kb upstream 0.5kb upstream 47 false ta_iwgsc_3ds_v1_2599489: 1-47 Triticum aestivum
Traes_3DS_88514D123 0.5kb downstream 0.5kb downstream 8127 true ta_iwgsc_3ds_v1_2599489: 48-8174 Triticum aestivum
Traes_3DS_88514D123 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_3ds_v1_2599489: 7675-8174 Triticum aestivum
Traes_3DS_88514D123 1.0kb upstream 1.0kb upstream 7674 true ta_iwgsc_3ds_v1_2599489: 1-7674 Triticum aestivum
Traes_3DS_88514D123 1.0kb upstream 1.0kb upstream 47 false ta_iwgsc_3ds_v1_2599489: 1-47 Triticum aestivum
Traes_3DS_88514D123 1.0kb downstream 1.0kb downstream 8205 true ta_iwgsc_3ds_v1_2599489: 48-8252 Triticum aestivum
Traes_3DS_88514D123 1.0kb downstream 1.0kb downstream 578 false ta_iwgsc_3ds_v1_2599489: 7675-8252 Triticum aestivum
Traes_3DS_88514D123 2.0kb upstream 2.0kb upstream 7674 true ta_iwgsc_3ds_v1_2599489: 1-7674 Triticum aestivum
Traes_3DS_88514D123 2.0kb upstream 2.0kb upstream 47 false ta_iwgsc_3ds_v1_2599489: 1-47 Triticum aestivum
Traes_3DS_88514D123 2.0kb downstream 2.0kb downstream 8205 true ta_iwgsc_3ds_v1_2599489: 48-8252 Triticum aestivum
Traes_3DS_88514D123 2.0kb downstream 2.0kb downstream 578 false ta_iwgsc_3ds_v1_2599489: 7675-8252 Triticum aestivum
Traes_3DS_88514D123 5.0kb upstream 5.0kb upstream 7674 true ta_iwgsc_3ds_v1_2599489: 1-7674 Triticum aestivum
Traes_3DS_88514D123 5.0kb upstream 5.0kb upstream 47 false ta_iwgsc_3ds_v1_2599489: 1-47 Triticum aestivum
Traes_3DS_88514D123 5.0kb downstream 5.0kb downstream 8205 true ta_iwgsc_3ds_v1_2599489: 48-8252 Triticum aestivum
Traes_3DS_88514D123 5.0kb downstream 5.0kb downstream 578 false ta_iwgsc_3ds_v1_2599489: 7675-8252 Triticum aestivum
Traes_3DS_88514D123 10.0kb upstream 10.0kb upstream 7674 true ta_iwgsc_3ds_v1_2599489: 1-7674 Triticum aestivum
Traes_3DS_88514D123 10.0kb upstream 10.0kb upstream 47 false ta_iwgsc_3ds_v1_2599489: 1-47 Triticum aestivum
Traes_3DS_88514D123 10.0kb downstream 10.0kb downstream 8205 true ta_iwgsc_3ds_v1_2599489: 48-8252 Triticum aestivum
Traes_3DS_88514D123 10.0kb downstream 10.0kb downstream 578 false ta_iwgsc_3ds_v1_2599489: 7675-8252 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584596 5269 Grass View MSA
122041718 5273 Angiosperm View MSA
121346039 5274 Embryophyte View MSA
123424871 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain