Gene : Traes_5BL_9F4C228C1 T. aestivum v2.2
Defline:  (1 of 3) PTHR22763:SF50 - E3 UBIQUITIN-PROTEIN LIGASE AIP2 Genomic Order:  1
Name:  ? Traes_5BL_9F4C228C1 Secondary Identifier:  ? PAC:31929798
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Taestivum PWY-7511 Triticum aestivum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_5BL_9F4C228C1 0.5kb upstream 0.5kb upstream 4581 true ta_iwgsc_5bl_v1_10795263: 2798-7378 Triticum aestivum
Traes_5BL_9F4C228C1 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_5bl_v1_10795263: 6879-7378 Triticum aestivum
Traes_5BL_9F4C228C1 0.5kb downstream 0.5kb downstream 4581 true ta_iwgsc_5bl_v1_10795263: 2298-6878 Triticum aestivum
Traes_5BL_9F4C228C1 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_5bl_v1_10795263: 2298-2797 Triticum aestivum
Traes_5BL_9F4C228C1 1.0kb upstream 1.0kb upstream 5081 true ta_iwgsc_5bl_v1_10795263: 2798-7878 Triticum aestivum
Traes_5BL_9F4C228C1 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_5bl_v1_10795263: 6879-7878 Triticum aestivum
Traes_5BL_9F4C228C1 1.0kb downstream 1.0kb downstream 5081 true ta_iwgsc_5bl_v1_10795263: 1798-6878 Triticum aestivum
Traes_5BL_9F4C228C1 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_5bl_v1_10795263: 1798-2797 Triticum aestivum
Traes_5BL_9F4C228C1 2.0kb upstream 2.0kb upstream 6081 true ta_iwgsc_5bl_v1_10795263: 2798-8878 Triticum aestivum
Traes_5BL_9F4C228C1 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_5bl_v1_10795263: 6879-8878 Triticum aestivum
Traes_5BL_9F4C228C1 2.0kb downstream 2.0kb downstream 6081 true ta_iwgsc_5bl_v1_10795263: 798-6878 Triticum aestivum
Traes_5BL_9F4C228C1 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_5bl_v1_10795263: 798-2797 Triticum aestivum
Traes_5BL_9F4C228C1 5.0kb upstream 5.0kb upstream 9081 true ta_iwgsc_5bl_v1_10795263: 2798-11878 Triticum aestivum
Traes_5BL_9F4C228C1 5.0kb upstream 5.0kb upstream 5000 false ta_iwgsc_5bl_v1_10795263: 6879-11878 Triticum aestivum
Traes_5BL_9F4C228C1 5.0kb downstream 5.0kb downstream 6878 true ta_iwgsc_5bl_v1_10795263: 1-6878 Triticum aestivum
Traes_5BL_9F4C228C1 5.0kb downstream 5.0kb downstream 2797 false ta_iwgsc_5bl_v1_10795263: 1-2797 Triticum aestivum
Traes_5BL_9F4C228C1 10.0kb upstream 10.0kb upstream 11961 true ta_iwgsc_5bl_v1_10795263: 2798-14758 Triticum aestivum
Traes_5BL_9F4C228C1 10.0kb upstream 10.0kb upstream 7880 false ta_iwgsc_5bl_v1_10795263: 6879-14758 Triticum aestivum
Traes_5BL_9F4C228C1 10.0kb downstream 10.0kb downstream 6878 true ta_iwgsc_5bl_v1_10795263: 1-6878 Triticum aestivum
Traes_5BL_9F4C228C1 10.0kb downstream 10.0kb downstream 2797 false ta_iwgsc_5bl_v1_10795263: 1-2797 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026169 5273 Angiosperm View MSA
124571949 5269 Grass View MSA
123429130 5275 Viridiplantae View MSA
121350344 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain