Gene : Traes_5BL_FCA06CE1F T. aestivum v2.2
Defline:  (1 of 3) PTHR12297 - HYPOXIA-INDUCBILE GENE 1 HIG1 -RELATED Genomic Order:  1
Name:  ? Traes_5BL_FCA06CE1F Secondary Identifier:  ? PAC:31938705
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_5BL_FCA06CE1F 0.5kb upstream 0.5kb upstream 3290 true ta_iwgsc_5bl_v1_10800904: 667-3956 Triticum aestivum
Traes_5BL_FCA06CE1F 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_5bl_v1_10800904: 667-1166 Triticum aestivum
Traes_5BL_FCA06CE1F 0.5kb downstream 0.5kb downstream 3290 true ta_iwgsc_5bl_v1_10800904: 1167-4456 Triticum aestivum
Traes_5BL_FCA06CE1F 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_5bl_v1_10800904: 3957-4456 Triticum aestivum
Traes_5BL_FCA06CE1F 1.0kb upstream 1.0kb upstream 3790 true ta_iwgsc_5bl_v1_10800904: 167-3956 Triticum aestivum
Traes_5BL_FCA06CE1F 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_5bl_v1_10800904: 167-1166 Triticum aestivum
Traes_5BL_FCA06CE1F 1.0kb downstream 1.0kb downstream 3790 true ta_iwgsc_5bl_v1_10800904: 1167-4956 Triticum aestivum
Traes_5BL_FCA06CE1F 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_5bl_v1_10800904: 3957-4956 Triticum aestivum
Traes_5BL_FCA06CE1F 2.0kb upstream 2.0kb upstream 3956 true ta_iwgsc_5bl_v1_10800904: 1-3956 Triticum aestivum
Traes_5BL_FCA06CE1F 2.0kb upstream 2.0kb upstream 1166 false ta_iwgsc_5bl_v1_10800904: 1-1166 Triticum aestivum
Traes_5BL_FCA06CE1F 2.0kb downstream 2.0kb downstream 4790 true ta_iwgsc_5bl_v1_10800904: 1167-5956 Triticum aestivum
Traes_5BL_FCA06CE1F 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_5bl_v1_10800904: 3957-5956 Triticum aestivum
Traes_5BL_FCA06CE1F 5.0kb upstream 5.0kb upstream 3956 true ta_iwgsc_5bl_v1_10800904: 1-3956 Triticum aestivum
Traes_5BL_FCA06CE1F 5.0kb upstream 5.0kb upstream 1166 false ta_iwgsc_5bl_v1_10800904: 1-1166 Triticum aestivum
Traes_5BL_FCA06CE1F 5.0kb downstream 5.0kb downstream 7790 true ta_iwgsc_5bl_v1_10800904: 1167-8956 Triticum aestivum
Traes_5BL_FCA06CE1F 5.0kb downstream 5.0kb downstream 5000 false ta_iwgsc_5bl_v1_10800904: 3957-8956 Triticum aestivum
Traes_5BL_FCA06CE1F 10.0kb upstream 10.0kb upstream 3956 true ta_iwgsc_5bl_v1_10800904: 1-3956 Triticum aestivum
Traes_5BL_FCA06CE1F 10.0kb upstream 10.0kb upstream 1166 false ta_iwgsc_5bl_v1_10800904: 1-1166 Triticum aestivum
Traes_5BL_FCA06CE1F 10.0kb downstream 10.0kb downstream 12790 true ta_iwgsc_5bl_v1_10800904: 1167-13956 Triticum aestivum
Traes_5BL_FCA06CE1F 10.0kb downstream 10.0kb downstream 10000 false ta_iwgsc_5bl_v1_10800904: 3957-13956 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571605 5269 Grass View MSA
122045148 5273 Angiosperm View MSA
121347874 5274 Embryophyte View MSA
123423754 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain