Gene : Traes_5BL_CC637257C T. aestivum v2.2
Defline:  (1 of 3) 2.5.1.21 - Squalene synthase / Squalene synthetase Genomic Order:  1
Name:  ? Traes_5BL_CC637257C Secondary Identifier:  ? PAC:31922650
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Taestivum PWY-2541 Triticum aestivum pathologic  
Taestivum PWY-5670 Triticum aestivum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_5BL_CC637257C 0.5kb upstream 0.5kb upstream 4528 true ta_iwgsc_5bl_v1_10818393: 4546-9073 Triticum aestivum
Traes_5BL_CC637257C 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_5bl_v1_10818393: 4546-5045 Triticum aestivum
Traes_5BL_CC637257C 0.5kb downstream 0.5kb downstream 4381 true ta_iwgsc_5bl_v1_10818393: 5046-9426 Triticum aestivum
Traes_5BL_CC637257C 0.5kb downstream 0.5kb downstream 353 false ta_iwgsc_5bl_v1_10818393: 9074-9426 Triticum aestivum
Traes_5BL_CC637257C 1.0kb upstream 1.0kb upstream 5028 true ta_iwgsc_5bl_v1_10818393: 4046-9073 Triticum aestivum
Traes_5BL_CC637257C 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_5bl_v1_10818393: 4046-5045 Triticum aestivum
Traes_5BL_CC637257C 1.0kb downstream 1.0kb downstream 4381 true ta_iwgsc_5bl_v1_10818393: 5046-9426 Triticum aestivum
Traes_5BL_CC637257C 1.0kb downstream 1.0kb downstream 353 false ta_iwgsc_5bl_v1_10818393: 9074-9426 Triticum aestivum
Traes_5BL_CC637257C 2.0kb upstream 2.0kb upstream 6028 true ta_iwgsc_5bl_v1_10818393: 3046-9073 Triticum aestivum
Traes_5BL_CC637257C 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_5bl_v1_10818393: 3046-5045 Triticum aestivum
Traes_5BL_CC637257C 2.0kb downstream 2.0kb downstream 4381 true ta_iwgsc_5bl_v1_10818393: 5046-9426 Triticum aestivum
Traes_5BL_CC637257C 2.0kb downstream 2.0kb downstream 353 false ta_iwgsc_5bl_v1_10818393: 9074-9426 Triticum aestivum
Traes_5BL_CC637257C 5.0kb upstream 5.0kb upstream 9028 true ta_iwgsc_5bl_v1_10818393: 46-9073 Triticum aestivum
Traes_5BL_CC637257C 5.0kb upstream 5.0kb upstream 5000 false ta_iwgsc_5bl_v1_10818393: 46-5045 Triticum aestivum
Traes_5BL_CC637257C 5.0kb downstream 5.0kb downstream 4381 true ta_iwgsc_5bl_v1_10818393: 5046-9426 Triticum aestivum
Traes_5BL_CC637257C 5.0kb downstream 5.0kb downstream 353 false ta_iwgsc_5bl_v1_10818393: 9074-9426 Triticum aestivum
Traes_5BL_CC637257C 10.0kb upstream 10.0kb upstream 9073 true ta_iwgsc_5bl_v1_10818393: 1-9073 Triticum aestivum
Traes_5BL_CC637257C 10.0kb upstream 10.0kb upstream 5045 false ta_iwgsc_5bl_v1_10818393: 1-5045 Triticum aestivum
Traes_5BL_CC637257C 10.0kb downstream 10.0kb downstream 4381 true ta_iwgsc_5bl_v1_10818393: 5046-9426 Triticum aestivum
Traes_5BL_CC637257C 10.0kb downstream 10.0kb downstream 353 false ta_iwgsc_5bl_v1_10818393: 9074-9426 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572418 5269 Grass View MSA
122042609 5273 Angiosperm View MSA
121351426 5274 Embryophyte View MSA
123424778 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain