Gene : Traes_5BL_3CDAF60EF T. aestivum v2.2
Defline:  (1 of 4) PTHR11079:SF58 - RNA PSEUDOURIDINE SYNTHASE 4, MITOCHONDRIAL Genomic Order:  1
Name:  ? Traes_5BL_3CDAF60EF Secondary Identifier:  ? PAC:31814293
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_5BL_3CDAF60EF 0.5kb upstream 0.5kb upstream 11054 true ta_iwgsc_5bl_v1_10866349: 2148-13201 Triticum aestivum
Traes_5BL_3CDAF60EF 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_5bl_v1_10866349: 2148-2647 Triticum aestivum
Traes_5BL_3CDAF60EF 0.5kb downstream 0.5kb downstream 11002 true ta_iwgsc_5bl_v1_10866349: 2648-13649 Triticum aestivum
Traes_5BL_3CDAF60EF 0.5kb downstream 0.5kb downstream 448 false ta_iwgsc_5bl_v1_10866349: 13202-13649 Triticum aestivum
Traes_5BL_3CDAF60EF 1.0kb upstream 1.0kb upstream 11554 true ta_iwgsc_5bl_v1_10866349: 1648-13201 Triticum aestivum
Traes_5BL_3CDAF60EF 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_5bl_v1_10866349: 1648-2647 Triticum aestivum
Traes_5BL_3CDAF60EF 1.0kb downstream 1.0kb downstream 11002 true ta_iwgsc_5bl_v1_10866349: 2648-13649 Triticum aestivum
Traes_5BL_3CDAF60EF 1.0kb downstream 1.0kb downstream 448 false ta_iwgsc_5bl_v1_10866349: 13202-13649 Triticum aestivum
Traes_5BL_3CDAF60EF 2.0kb upstream 2.0kb upstream 12554 true ta_iwgsc_5bl_v1_10866349: 648-13201 Triticum aestivum
Traes_5BL_3CDAF60EF 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_5bl_v1_10866349: 648-2647 Triticum aestivum
Traes_5BL_3CDAF60EF 2.0kb downstream 2.0kb downstream 11002 true ta_iwgsc_5bl_v1_10866349: 2648-13649 Triticum aestivum
Traes_5BL_3CDAF60EF 2.0kb downstream 2.0kb downstream 448 false ta_iwgsc_5bl_v1_10866349: 13202-13649 Triticum aestivum
Traes_5BL_3CDAF60EF 5.0kb upstream 5.0kb upstream 13201 true ta_iwgsc_5bl_v1_10866349: 1-13201 Triticum aestivum
Traes_5BL_3CDAF60EF 5.0kb upstream 5.0kb upstream 2647 false ta_iwgsc_5bl_v1_10866349: 1-2647 Triticum aestivum
Traes_5BL_3CDAF60EF 5.0kb downstream 5.0kb downstream 11002 true ta_iwgsc_5bl_v1_10866349: 2648-13649 Triticum aestivum
Traes_5BL_3CDAF60EF 5.0kb downstream 5.0kb downstream 448 false ta_iwgsc_5bl_v1_10866349: 13202-13649 Triticum aestivum
Traes_5BL_3CDAF60EF 10.0kb upstream 10.0kb upstream 13201 true ta_iwgsc_5bl_v1_10866349: 1-13201 Triticum aestivum
Traes_5BL_3CDAF60EF 10.0kb upstream 10.0kb upstream 2647 false ta_iwgsc_5bl_v1_10866349: 1-2647 Triticum aestivum
Traes_5BL_3CDAF60EF 10.0kb downstream 10.0kb downstream 11002 true ta_iwgsc_5bl_v1_10866349: 2648-13649 Triticum aestivum
Traes_5BL_3CDAF60EF 10.0kb downstream 10.0kb downstream 448 false ta_iwgsc_5bl_v1_10866349: 13202-13649 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585042 5269 Grass View MSA
122044884 5273 Angiosperm View MSA
121348863 5274 Embryophyte View MSA
123426669 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain