Gene : Traes_5BL_6642E2A8B T. aestivum v2.2
Defline:  (1 of 6) PTHR30523//PTHR30523:SF8 - PHOSPHOENOLPYRUVATE CARBOXYLASE Genomic Order:  2
Name:  ? Traes_5BL_6642E2A8B Secondary Identifier:  ? PAC:31816761
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Taestivum PWY-241 Triticum aestivum pathologic  
Taestivum PWY-6549 Triticum aestivum pathologic  
Taestivum PWY-7115 Triticum aestivum pathologic  
Taestivum PWY-7117 Triticum aestivum pathologic  
Taestivum PWYQT-4429 Triticum aestivum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_5BL_6642E2A8B 0.5kb upstream 0.5kb upstream 6135 true ta_iwgsc_5bl_v1_10925189: 9463-15597 Triticum aestivum
Traes_5BL_6642E2A8B 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_5bl_v1_10925189: 15098-15597 Triticum aestivum
Traes_5BL_6642E2A8B 0.5kb downstream 0.5kb downstream 6135 true ta_iwgsc_5bl_v1_10925189: 8963-15097 Triticum aestivum
Traes_5BL_6642E2A8B 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_5bl_v1_10925189: 8963-9462 Triticum aestivum
Traes_5BL_6642E2A8B 1.0kb upstream 1.0kb upstream 6635 true ta_iwgsc_5bl_v1_10925189: 9463-16097 Triticum aestivum
Traes_5BL_6642E2A8B 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_5bl_v1_10925189: 15098-16097 Triticum aestivum
Traes_5BL_6642E2A8B 1.0kb downstream 1.0kb downstream 6635 true ta_iwgsc_5bl_v1_10925189: 8463-15097 Triticum aestivum
Traes_5BL_6642E2A8B 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_5bl_v1_10925189: 8463-9462 Triticum aestivum
Traes_5BL_6642E2A8B 2.0kb upstream 2.0kb upstream 7635 true ta_iwgsc_5bl_v1_10925189: 9463-17097 Triticum aestivum
Traes_5BL_6642E2A8B 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_5bl_v1_10925189: 15098-17097 Triticum aestivum
Traes_5BL_6642E2A8B 2.0kb downstream 2.0kb downstream 7635 true ta_iwgsc_5bl_v1_10925189: 7463-15097 Triticum aestivum
Traes_5BL_6642E2A8B 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_5bl_v1_10925189: 7463-9462 Triticum aestivum
Traes_5BL_6642E2A8B 5.0kb upstream 5.0kb upstream 10635 true ta_iwgsc_5bl_v1_10925189: 9463-20097 Triticum aestivum
Traes_5BL_6642E2A8B 5.0kb upstream 5.0kb upstream 5000 false ta_iwgsc_5bl_v1_10925189: 15098-20097 Triticum aestivum
Traes_5BL_6642E2A8B 5.0kb downstream 5.0kb downstream 10635 true ta_iwgsc_5bl_v1_10925189: 4463-15097 Triticum aestivum
Traes_5BL_6642E2A8B 5.0kb downstream 5.0kb downstream 5000 false ta_iwgsc_5bl_v1_10925189: 4463-9462 Triticum aestivum
Traes_5BL_6642E2A8B 10.0kb upstream 10.0kb upstream 15635 true ta_iwgsc_5bl_v1_10925189: 9463-25097 Triticum aestivum
Traes_5BL_6642E2A8B 10.0kb upstream 10.0kb upstream 10000 false ta_iwgsc_5bl_v1_10925189: 15098-25097 Triticum aestivum
Traes_5BL_6642E2A8B 10.0kb downstream 10.0kb downstream 15097 true ta_iwgsc_5bl_v1_10925189: 1-15097 Triticum aestivum
Traes_5BL_6642E2A8B 10.0kb downstream 10.0kb downstream 9462 false ta_iwgsc_5bl_v1_10925189: 1-9462 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572934 5269 Grass View MSA
122043424 5273 Angiosperm View MSA
123429064 5275 Viridiplantae View MSA
121350778 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain