Gene : Traes_5DL_C93181356 T. aestivum v2.2
Defline:  (1 of 20) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  3
Name:  ? Traes_5DL_C93181356 Secondary Identifier:  ? PAC:31793687
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_5DL_C93181356 0.5kb upstream 0.5kb upstream 4265 true ta_iwgsc_5dl_v1_4504283: 23056-27320 Triticum aestivum
Traes_5DL_C93181356 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_5dl_v1_4504283: 23056-23555 Triticum aestivum
Traes_5DL_C93181356 0.5kb downstream 0.5kb downstream 4265 true ta_iwgsc_5dl_v1_4504283: 23556-27820 Triticum aestivum
Traes_5DL_C93181356 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_5dl_v1_4504283: 27321-27820 Triticum aestivum
Traes_5DL_C93181356 1.0kb upstream 1.0kb upstream 4765 true ta_iwgsc_5dl_v1_4504283: 22556-27320 Triticum aestivum
Traes_5DL_C93181356 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_5dl_v1_4504283: 22556-23555 Triticum aestivum
Traes_5DL_C93181356 1.0kb downstream 1.0kb downstream 4765 true ta_iwgsc_5dl_v1_4504283: 23556-28320 Triticum aestivum
Traes_5DL_C93181356 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_5dl_v1_4504283: 27321-28320 Triticum aestivum
Traes_5DL_C93181356 2.0kb upstream 2.0kb upstream 5765 true ta_iwgsc_5dl_v1_4504283: 21556-27320 Triticum aestivum
Traes_5DL_C93181356 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_5dl_v1_4504283: 21556-23555 Triticum aestivum
Traes_5DL_C93181356 2.0kb downstream 2.0kb downstream 5765 true ta_iwgsc_5dl_v1_4504283: 23556-29320 Triticum aestivum
Traes_5DL_C93181356 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_5dl_v1_4504283: 27321-29320 Triticum aestivum
Traes_5DL_C93181356 5.0kb upstream 5.0kb upstream 8765 true ta_iwgsc_5dl_v1_4504283: 18556-27320 Triticum aestivum
Traes_5DL_C93181356 5.0kb upstream 5.0kb upstream 5000 false ta_iwgsc_5dl_v1_4504283: 18556-23555 Triticum aestivum
Traes_5DL_C93181356 5.0kb downstream 5.0kb downstream 8710 true ta_iwgsc_5dl_v1_4504283: 23556-32265 Triticum aestivum
Traes_5DL_C93181356 5.0kb downstream 5.0kb downstream 4945 false ta_iwgsc_5dl_v1_4504283: 27321-32265 Triticum aestivum
Traes_5DL_C93181356 10.0kb upstream 10.0kb upstream 13765 true ta_iwgsc_5dl_v1_4504283: 13556-27320 Triticum aestivum
Traes_5DL_C93181356 10.0kb upstream 10.0kb upstream 10000 false ta_iwgsc_5dl_v1_4504283: 13556-23555 Triticum aestivum
Traes_5DL_C93181356 10.0kb downstream 10.0kb downstream 8710 true ta_iwgsc_5dl_v1_4504283: 23556-32265 Triticum aestivum
Traes_5DL_C93181356 10.0kb downstream 10.0kb downstream 4945 false ta_iwgsc_5dl_v1_4504283: 27321-32265 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571390 5269 Grass View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain