Gene : Traes_5DL_0CC37EAA3 T. aestivum v2.2
Defline:  (1 of 5) PTHR21737:SF4 - CACTIN Genomic Order:  2
Name:  ? Traes_5DL_0CC37EAA3 Secondary Identifier:  ? PAC:31794452
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_5DL_0CC37EAA3 0.5kb upstream 0.5kb upstream 7304 true ta_iwgsc_5dl_v1_4532779: 2873-10176 Triticum aestivum
Traes_5DL_0CC37EAA3 0.5kb upstream 0.5kb upstream 2 false ta_iwgsc_5dl_v1_4532779: 10175-10176 Triticum aestivum
Traes_5DL_0CC37EAA3 0.5kb downstream 0.5kb downstream 7802 true ta_iwgsc_5dl_v1_4532779: 2373-10174 Triticum aestivum
Traes_5DL_0CC37EAA3 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_5dl_v1_4532779: 2373-2872 Triticum aestivum
Traes_5DL_0CC37EAA3 1.0kb upstream 1.0kb upstream 7304 true ta_iwgsc_5dl_v1_4532779: 2873-10176 Triticum aestivum
Traes_5DL_0CC37EAA3 1.0kb upstream 1.0kb upstream 2 false ta_iwgsc_5dl_v1_4532779: 10175-10176 Triticum aestivum
Traes_5DL_0CC37EAA3 1.0kb downstream 1.0kb downstream 8302 true ta_iwgsc_5dl_v1_4532779: 1873-10174 Triticum aestivum
Traes_5DL_0CC37EAA3 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_5dl_v1_4532779: 1873-2872 Triticum aestivum
Traes_5DL_0CC37EAA3 2.0kb upstream 2.0kb upstream 7304 true ta_iwgsc_5dl_v1_4532779: 2873-10176 Triticum aestivum
Traes_5DL_0CC37EAA3 2.0kb upstream 2.0kb upstream 2 false ta_iwgsc_5dl_v1_4532779: 10175-10176 Triticum aestivum
Traes_5DL_0CC37EAA3 2.0kb downstream 2.0kb downstream 9302 true ta_iwgsc_5dl_v1_4532779: 873-10174 Triticum aestivum
Traes_5DL_0CC37EAA3 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_5dl_v1_4532779: 873-2872 Triticum aestivum
Traes_5DL_0CC37EAA3 5.0kb upstream 5.0kb upstream 7304 true ta_iwgsc_5dl_v1_4532779: 2873-10176 Triticum aestivum
Traes_5DL_0CC37EAA3 5.0kb upstream 5.0kb upstream 2 false ta_iwgsc_5dl_v1_4532779: 10175-10176 Triticum aestivum
Traes_5DL_0CC37EAA3 5.0kb downstream 5.0kb downstream 10174 true ta_iwgsc_5dl_v1_4532779: 1-10174 Triticum aestivum
Traes_5DL_0CC37EAA3 5.0kb downstream 5.0kb downstream 2872 false ta_iwgsc_5dl_v1_4532779: 1-2872 Triticum aestivum
Traes_5DL_0CC37EAA3 10.0kb upstream 10.0kb upstream 7304 true ta_iwgsc_5dl_v1_4532779: 2873-10176 Triticum aestivum
Traes_5DL_0CC37EAA3 10.0kb upstream 10.0kb upstream 2 false ta_iwgsc_5dl_v1_4532779: 10175-10176 Triticum aestivum
Traes_5DL_0CC37EAA3 10.0kb downstream 10.0kb downstream 10174 true ta_iwgsc_5dl_v1_4532779: 1-10174 Triticum aestivum
Traes_5DL_0CC37EAA3 10.0kb downstream 10.0kb downstream 2872 false ta_iwgsc_5dl_v1_4532779: 1-2872 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582087 5269 Grass View MSA
122043327 5273 Angiosperm View MSA
121346365 5274 Embryophyte View MSA
123428349 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain