Gene : Traes_5DL_522725660 T. aestivum v2.2
Defline:  (1 of 5) PTHR11778:SF0 - SERINE--TRNA LIGASE, MITOCHONDRIAL Genomic Order:  1
Name:  ? Traes_5DL_522725660 Secondary Identifier:  ? PAC:31887370
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Taestivum TRNA-CHARGING-PWY Triticum aestivum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_5DL_522725660 0.5kb upstream 0.5kb upstream 12179 true ta_iwgsc_5dl_v1_4594545: 3243-15421 Triticum aestivum
Traes_5DL_522725660 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_5dl_v1_4594545: 14922-15421 Triticum aestivum
Traes_5DL_522725660 0.5kb downstream 0.5kb downstream 12179 true ta_iwgsc_5dl_v1_4594545: 2743-14921 Triticum aestivum
Traes_5DL_522725660 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_5dl_v1_4594545: 2743-3242 Triticum aestivum
Traes_5DL_522725660 1.0kb upstream 1.0kb upstream 12679 true ta_iwgsc_5dl_v1_4594545: 3243-15921 Triticum aestivum
Traes_5DL_522725660 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_5dl_v1_4594545: 14922-15921 Triticum aestivum
Traes_5DL_522725660 1.0kb downstream 1.0kb downstream 12679 true ta_iwgsc_5dl_v1_4594545: 2243-14921 Triticum aestivum
Traes_5DL_522725660 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_5dl_v1_4594545: 2243-3242 Triticum aestivum
Traes_5DL_522725660 2.0kb upstream 2.0kb upstream 13679 true ta_iwgsc_5dl_v1_4594545: 3243-16921 Triticum aestivum
Traes_5DL_522725660 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_5dl_v1_4594545: 14922-16921 Triticum aestivum
Traes_5DL_522725660 2.0kb downstream 2.0kb downstream 13679 true ta_iwgsc_5dl_v1_4594545: 1243-14921 Triticum aestivum
Traes_5DL_522725660 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_5dl_v1_4594545: 1243-3242 Triticum aestivum
Traes_5DL_522725660 5.0kb upstream 5.0kb upstream 16679 true ta_iwgsc_5dl_v1_4594545: 3243-19921 Triticum aestivum
Traes_5DL_522725660 5.0kb upstream 5.0kb upstream 5000 false ta_iwgsc_5dl_v1_4594545: 14922-19921 Triticum aestivum
Traes_5DL_522725660 5.0kb downstream 5.0kb downstream 14921 true ta_iwgsc_5dl_v1_4594545: 1-14921 Triticum aestivum
Traes_5DL_522725660 5.0kb downstream 5.0kb downstream 3242 false ta_iwgsc_5dl_v1_4594545: 1-3242 Triticum aestivum
Traes_5DL_522725660 10.0kb upstream 10.0kb upstream 17846 true ta_iwgsc_5dl_v1_4594545: 3243-21088 Triticum aestivum
Traes_5DL_522725660 10.0kb upstream 10.0kb upstream 6167 false ta_iwgsc_5dl_v1_4594545: 14922-21088 Triticum aestivum
Traes_5DL_522725660 10.0kb downstream 10.0kb downstream 14921 true ta_iwgsc_5dl_v1_4594545: 1-14921 Triticum aestivum
Traes_5DL_522725660 10.0kb downstream 10.0kb downstream 3242 false ta_iwgsc_5dl_v1_4594545: 1-3242 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580414 5269 Grass View MSA
122045874 5273 Angiosperm View MSA
121344249 5274 Embryophyte View MSA
123424928 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain