Gene : Traes_5DL_514F6294B T. aestivum v2.2
Defline:  (1 of 3) KOG1459 - Squalene synthetase Genomic Order:  2
Name:  ? Traes_5DL_514F6294B Secondary Identifier:  ? PAC:31973295
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Taestivum CAROTENOID-PWY Triticum aestivum pathologic  
Taestivum PWY-6475 Triticum aestivum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_5DL_514F6294B 0.5kb upstream 0.5kb upstream 2729 true ta_iwgsc_5dl_v1_4605624: 6513-9241 Triticum aestivum
Traes_5DL_514F6294B 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_5dl_v1_4605624: 8742-9241 Triticum aestivum
Traes_5DL_514F6294B 0.5kb downstream 0.5kb downstream 2729 true ta_iwgsc_5dl_v1_4605624: 6013-8741 Triticum aestivum
Traes_5DL_514F6294B 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_5dl_v1_4605624: 6013-6512 Triticum aestivum
Traes_5DL_514F6294B 1.0kb upstream 1.0kb upstream 3229 true ta_iwgsc_5dl_v1_4605624: 6513-9741 Triticum aestivum
Traes_5DL_514F6294B 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_5dl_v1_4605624: 8742-9741 Triticum aestivum
Traes_5DL_514F6294B 1.0kb downstream 1.0kb downstream 3229 true ta_iwgsc_5dl_v1_4605624: 5513-8741 Triticum aestivum
Traes_5DL_514F6294B 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_5dl_v1_4605624: 5513-6512 Triticum aestivum
Traes_5DL_514F6294B 2.0kb upstream 2.0kb upstream 4229 true ta_iwgsc_5dl_v1_4605624: 6513-10741 Triticum aestivum
Traes_5DL_514F6294B 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_5dl_v1_4605624: 8742-10741 Triticum aestivum
Traes_5DL_514F6294B 2.0kb downstream 2.0kb downstream 4229 true ta_iwgsc_5dl_v1_4605624: 4513-8741 Triticum aestivum
Traes_5DL_514F6294B 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_5dl_v1_4605624: 4513-6512 Triticum aestivum
Traes_5DL_514F6294B 5.0kb upstream 5.0kb upstream 7229 true ta_iwgsc_5dl_v1_4605624: 6513-13741 Triticum aestivum
Traes_5DL_514F6294B 5.0kb upstream 5.0kb upstream 5000 false ta_iwgsc_5dl_v1_4605624: 8742-13741 Triticum aestivum
Traes_5DL_514F6294B 5.0kb downstream 5.0kb downstream 7229 true ta_iwgsc_5dl_v1_4605624: 1513-8741 Triticum aestivum
Traes_5DL_514F6294B 5.0kb downstream 5.0kb downstream 5000 false ta_iwgsc_5dl_v1_4605624: 1513-6512 Triticum aestivum
Traes_5DL_514F6294B 10.0kb upstream 10.0kb upstream 12229 true ta_iwgsc_5dl_v1_4605624: 6513-18741 Triticum aestivum
Traes_5DL_514F6294B 10.0kb upstream 10.0kb upstream 10000 false ta_iwgsc_5dl_v1_4605624: 8742-18741 Triticum aestivum
Traes_5DL_514F6294B 10.0kb downstream 10.0kb downstream 8741 true ta_iwgsc_5dl_v1_4605624: 1-8741 Triticum aestivum
Traes_5DL_514F6294B 10.0kb downstream 10.0kb downstream 6512 false ta_iwgsc_5dl_v1_4605624: 1-6512 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121993341 5273 Angiosperm View MSA
124577513 5269 Grass View MSA
121263628 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain