Gene : Traes_5DS_F52BF30AA T. aestivum v2.2
Defline:  (1 of 12) PF12767 - Transcriptional regulator of RNA polII, SAGA, subunit (SAGA-Tad1) Genomic Order:  1
Name:  ? Traes_5DS_F52BF30AA Secondary Identifier:  ? PAC:31893378
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_5DS_F52BF30AA 0.5kb upstream 0.5kb upstream 2357 true ta_iwgsc_5ds_v1_382858: 2060-4416 Triticum aestivum
Traes_5DS_F52BF30AA 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_5ds_v1_382858: 2060-2559 Triticum aestivum
Traes_5DS_F52BF30AA 0.5kb downstream 0.5kb downstream 2357 true ta_iwgsc_5ds_v1_382858: 2560-4916 Triticum aestivum
Traes_5DS_F52BF30AA 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_5ds_v1_382858: 4417-4916 Triticum aestivum
Traes_5DS_F52BF30AA 1.0kb upstream 1.0kb upstream 2857 true ta_iwgsc_5ds_v1_382858: 1560-4416 Triticum aestivum
Traes_5DS_F52BF30AA 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_5ds_v1_382858: 1560-2559 Triticum aestivum
Traes_5DS_F52BF30AA 1.0kb downstream 1.0kb downstream 2857 true ta_iwgsc_5ds_v1_382858: 2560-5416 Triticum aestivum
Traes_5DS_F52BF30AA 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_5ds_v1_382858: 4417-5416 Triticum aestivum
Traes_5DS_F52BF30AA 2.0kb upstream 2.0kb upstream 3857 true ta_iwgsc_5ds_v1_382858: 560-4416 Triticum aestivum
Traes_5DS_F52BF30AA 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_5ds_v1_382858: 560-2559 Triticum aestivum
Traes_5DS_F52BF30AA 2.0kb downstream 2.0kb downstream 3857 true ta_iwgsc_5ds_v1_382858: 2560-6416 Triticum aestivum
Traes_5DS_F52BF30AA 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_5ds_v1_382858: 4417-6416 Triticum aestivum
Traes_5DS_F52BF30AA 5.0kb upstream 5.0kb upstream 4416 true ta_iwgsc_5ds_v1_382858: 1-4416 Triticum aestivum
Traes_5DS_F52BF30AA 5.0kb upstream 5.0kb upstream 2559 false ta_iwgsc_5ds_v1_382858: 1-2559 Triticum aestivum
Traes_5DS_F52BF30AA 5.0kb downstream 5.0kb downstream 6857 true ta_iwgsc_5ds_v1_382858: 2560-9416 Triticum aestivum
Traes_5DS_F52BF30AA 5.0kb downstream 5.0kb downstream 5000 false ta_iwgsc_5ds_v1_382858: 4417-9416 Triticum aestivum
Traes_5DS_F52BF30AA 10.0kb upstream 10.0kb upstream 4416 true ta_iwgsc_5ds_v1_382858: 1-4416 Triticum aestivum
Traes_5DS_F52BF30AA 10.0kb upstream 10.0kb upstream 2559 false ta_iwgsc_5ds_v1_382858: 1-2559 Triticum aestivum
Traes_5DS_F52BF30AA 10.0kb downstream 10.0kb downstream 11101 true ta_iwgsc_5ds_v1_382858: 2560-13660 Triticum aestivum
Traes_5DS_F52BF30AA 10.0kb downstream 10.0kb downstream 9244 false ta_iwgsc_5ds_v1_382858: 4417-13660 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579373 5269 Grass View MSA
122050052 5273 Angiosperm View MSA
121311708 5274 Embryophyte View MSA
123348971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain