Gene : Traes_5DS_AEC533CD9 T. aestivum v2.2
Defline:  (1 of 7) PTHR11877//PTHR11877:SF25 - HYDROXYMETHYLGLUTARYL-COA SYNTHASE Genomic Order:  1
Name:  ? Traes_5DS_AEC533CD9 Secondary Identifier:  ? PAC:31909164
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_5DS_AEC533CD9 0.5kb upstream 0.5kb upstream 2199 true ta_iwgsc_5ds_v1_2781112: 3654-5852 Triticum aestivum
Traes_5DS_AEC533CD9 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_5ds_v1_2781112: 3654-4153 Triticum aestivum
Traes_5DS_AEC533CD9 0.5kb downstream 0.5kb downstream 2199 true ta_iwgsc_5ds_v1_2781112: 4154-6352 Triticum aestivum
Traes_5DS_AEC533CD9 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_5ds_v1_2781112: 5853-6352 Triticum aestivum
Traes_5DS_AEC533CD9 1.0kb upstream 1.0kb upstream 2699 true ta_iwgsc_5ds_v1_2781112: 3154-5852 Triticum aestivum
Traes_5DS_AEC533CD9 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_5ds_v1_2781112: 3154-4153 Triticum aestivum
Traes_5DS_AEC533CD9 1.0kb downstream 1.0kb downstream 2699 true ta_iwgsc_5ds_v1_2781112: 4154-6852 Triticum aestivum
Traes_5DS_AEC533CD9 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_5ds_v1_2781112: 5853-6852 Triticum aestivum
Traes_5DS_AEC533CD9 2.0kb upstream 2.0kb upstream 3699 true ta_iwgsc_5ds_v1_2781112: 2154-5852 Triticum aestivum
Traes_5DS_AEC533CD9 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_5ds_v1_2781112: 2154-4153 Triticum aestivum
Traes_5DS_AEC533CD9 2.0kb downstream 2.0kb downstream 3699 true ta_iwgsc_5ds_v1_2781112: 4154-7852 Triticum aestivum
Traes_5DS_AEC533CD9 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_5ds_v1_2781112: 5853-7852 Triticum aestivum
Traes_5DS_AEC533CD9 5.0kb upstream 5.0kb upstream 5852 true ta_iwgsc_5ds_v1_2781112: 1-5852 Triticum aestivum
Traes_5DS_AEC533CD9 5.0kb upstream 5.0kb upstream 4153 false ta_iwgsc_5ds_v1_2781112: 1-4153 Triticum aestivum
Traes_5DS_AEC533CD9 5.0kb downstream 5.0kb downstream 6699 true ta_iwgsc_5ds_v1_2781112: 4154-10852 Triticum aestivum
Traes_5DS_AEC533CD9 5.0kb downstream 5.0kb downstream 5000 false ta_iwgsc_5ds_v1_2781112: 5853-10852 Triticum aestivum
Traes_5DS_AEC533CD9 10.0kb upstream 10.0kb upstream 5852 true ta_iwgsc_5ds_v1_2781112: 1-5852 Triticum aestivum
Traes_5DS_AEC533CD9 10.0kb upstream 10.0kb upstream 4153 false ta_iwgsc_5ds_v1_2781112: 1-4153 Triticum aestivum
Traes_5DS_AEC533CD9 10.0kb downstream 10.0kb downstream 11699 true ta_iwgsc_5ds_v1_2781112: 4154-15852 Triticum aestivum
Traes_5DS_AEC533CD9 10.0kb downstream 10.0kb downstream 10000 false ta_iwgsc_5ds_v1_2781112: 5853-15852 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577325 5269 Grass View MSA
122042999 5273 Angiosperm View MSA
121348952 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain