Gene : Traes_6AL_28CCA7F5D T. aestivum v2.2
Defline:  (1 of 17) 4.2.1.3 - Aconitate hydratase / Citrate(isocitrate) hydro-lyase Genomic Order:  1
Name:  ? Traes_6AL_28CCA7F5D Secondary Identifier:  ? PAC:31978427
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Taestivum GLYOXYLATE-BYPASS Triticum aestivum pathologic  
Taestivum PWY-5464 Triticum aestivum pathologic  
Taestivum PWY-561 Triticum aestivum pathologic  
Taestivum PWY-5690 Triticum aestivum pathologic  
Taestivum PWY-6549 Triticum aestivum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_6AL_28CCA7F5D 0.5kb upstream 0.5kb upstream 7993 true ta_iwgsc_6al_v1_5750299: 5989-13981 Triticum aestivum
Traes_6AL_28CCA7F5D 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_6al_v1_5750299: 5989-6488 Triticum aestivum
Traes_6AL_28CCA7F5D 0.5kb downstream 0.5kb downstream 7658 true ta_iwgsc_6al_v1_5750299: 6489-14146 Triticum aestivum
Traes_6AL_28CCA7F5D 0.5kb downstream 0.5kb downstream 165 false ta_iwgsc_6al_v1_5750299: 13982-14146 Triticum aestivum
Traes_6AL_28CCA7F5D 1.0kb upstream 1.0kb upstream 8493 true ta_iwgsc_6al_v1_5750299: 5489-13981 Triticum aestivum
Traes_6AL_28CCA7F5D 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_6al_v1_5750299: 5489-6488 Triticum aestivum
Traes_6AL_28CCA7F5D 1.0kb downstream 1.0kb downstream 7658 true ta_iwgsc_6al_v1_5750299: 6489-14146 Triticum aestivum
Traes_6AL_28CCA7F5D 1.0kb downstream 1.0kb downstream 165 false ta_iwgsc_6al_v1_5750299: 13982-14146 Triticum aestivum
Traes_6AL_28CCA7F5D 2.0kb upstream 2.0kb upstream 9493 true ta_iwgsc_6al_v1_5750299: 4489-13981 Triticum aestivum
Traes_6AL_28CCA7F5D 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_6al_v1_5750299: 4489-6488 Triticum aestivum
Traes_6AL_28CCA7F5D 2.0kb downstream 2.0kb downstream 7658 true ta_iwgsc_6al_v1_5750299: 6489-14146 Triticum aestivum
Traes_6AL_28CCA7F5D 2.0kb downstream 2.0kb downstream 165 false ta_iwgsc_6al_v1_5750299: 13982-14146 Triticum aestivum
Traes_6AL_28CCA7F5D 5.0kb upstream 5.0kb upstream 12493 true ta_iwgsc_6al_v1_5750299: 1489-13981 Triticum aestivum
Traes_6AL_28CCA7F5D 5.0kb upstream 5.0kb upstream 5000 false ta_iwgsc_6al_v1_5750299: 1489-6488 Triticum aestivum
Traes_6AL_28CCA7F5D 5.0kb downstream 5.0kb downstream 7658 true ta_iwgsc_6al_v1_5750299: 6489-14146 Triticum aestivum
Traes_6AL_28CCA7F5D 5.0kb downstream 5.0kb downstream 165 false ta_iwgsc_6al_v1_5750299: 13982-14146 Triticum aestivum
Traes_6AL_28CCA7F5D 10.0kb upstream 10.0kb upstream 13981 true ta_iwgsc_6al_v1_5750299: 1-13981 Triticum aestivum
Traes_6AL_28CCA7F5D 10.0kb upstream 10.0kb upstream 6488 false ta_iwgsc_6al_v1_5750299: 1-6488 Triticum aestivum
Traes_6AL_28CCA7F5D 10.0kb downstream 10.0kb downstream 7658 true ta_iwgsc_6al_v1_5750299: 6489-14146 Triticum aestivum
Traes_6AL_28CCA7F5D 10.0kb downstream 10.0kb downstream 165 false ta_iwgsc_6al_v1_5750299: 13982-14146 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578353 5269 Grass View MSA
122043810 5273 Angiosperm View MSA
121344247 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain