Gene : Traes_6AS_6FE528AD1 T. aestivum v2.2
Defline:  (1 of 1) PTHR34940:SF1 - PHOTOSYSTEM II 5 KDA PROTEIN, CHLOROPLASTIC Genomic Order:  1
Name:  ? Traes_6AS_6FE528AD1 Secondary Identifier:  ? PAC:31891137
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_6AS_6FE528AD1 0.5kb upstream 0.5kb upstream 1472 true ta_iwgsc_6as_v1_3291344: 3462-4933 Triticum aestivum
Traes_6AS_6FE528AD1 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_6as_v1_3291344: 3462-3961 Triticum aestivum
Traes_6AS_6FE528AD1 0.5kb downstream 0.5kb downstream 1472 true ta_iwgsc_6as_v1_3291344: 3962-5433 Triticum aestivum
Traes_6AS_6FE528AD1 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_6as_v1_3291344: 4934-5433 Triticum aestivum
Traes_6AS_6FE528AD1 1.0kb upstream 1.0kb upstream 1972 true ta_iwgsc_6as_v1_3291344: 2962-4933 Triticum aestivum
Traes_6AS_6FE528AD1 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_6as_v1_3291344: 2962-3961 Triticum aestivum
Traes_6AS_6FE528AD1 1.0kb downstream 1.0kb downstream 1972 true ta_iwgsc_6as_v1_3291344: 3962-5933 Triticum aestivum
Traes_6AS_6FE528AD1 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_6as_v1_3291344: 4934-5933 Triticum aestivum
Traes_6AS_6FE528AD1 2.0kb upstream 2.0kb upstream 2972 true ta_iwgsc_6as_v1_3291344: 1962-4933 Triticum aestivum
Traes_6AS_6FE528AD1 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_6as_v1_3291344: 1962-3961 Triticum aestivum
Traes_6AS_6FE528AD1 2.0kb downstream 2.0kb downstream 2972 true ta_iwgsc_6as_v1_3291344: 3962-6933 Triticum aestivum
Traes_6AS_6FE528AD1 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_6as_v1_3291344: 4934-6933 Triticum aestivum
Traes_6AS_6FE528AD1 5.0kb upstream 5.0kb upstream 4933 true ta_iwgsc_6as_v1_3291344: 1-4933 Triticum aestivum
Traes_6AS_6FE528AD1 5.0kb upstream 5.0kb upstream 3961 false ta_iwgsc_6as_v1_3291344: 1-3961 Triticum aestivum
Traes_6AS_6FE528AD1 5.0kb downstream 5.0kb downstream 5972 true ta_iwgsc_6as_v1_3291344: 3962-9933 Triticum aestivum
Traes_6AS_6FE528AD1 5.0kb downstream 5.0kb downstream 5000 false ta_iwgsc_6as_v1_3291344: 4934-9933 Triticum aestivum
Traes_6AS_6FE528AD1 10.0kb upstream 10.0kb upstream 4933 true ta_iwgsc_6as_v1_3291344: 1-4933 Triticum aestivum
Traes_6AS_6FE528AD1 10.0kb upstream 10.0kb upstream 3961 false ta_iwgsc_6as_v1_3291344: 1-3961 Triticum aestivum
Traes_6AS_6FE528AD1 10.0kb downstream 10.0kb downstream 9809 true ta_iwgsc_6as_v1_3291344: 3962-13770 Triticum aestivum
Traes_6AS_6FE528AD1 10.0kb downstream 10.0kb downstream 8837 false ta_iwgsc_6as_v1_3291344: 4934-13770 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584693 5269 Grass View MSA
122046745 5273 Angiosperm View MSA
121349271 5274 Embryophyte View MSA
123427633 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain