Gene : Traes_6AS_E159E095A T. aestivum v2.2
Defline:  (1 of 7) PTHR33428:SF2 - CHLOROPHYLLASE-1 Genomic Order:  1
Name:  ? Traes_6AS_E159E095A Secondary Identifier:  ? PAC:31932065
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Taestivum PWY-6927 Triticum aestivum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_6AS_E159E095A 0.5kb upstream 0.5kb upstream 1714 true ta_iwgsc_6as_v1_4397115: 3151-4864 Triticum aestivum
Traes_6AS_E159E095A 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_6as_v1_4397115: 4365-4864 Triticum aestivum
Traes_6AS_E159E095A 0.5kb downstream 0.5kb downstream 1714 true ta_iwgsc_6as_v1_4397115: 2651-4364 Triticum aestivum
Traes_6AS_E159E095A 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_6as_v1_4397115: 2651-3150 Triticum aestivum
Traes_6AS_E159E095A 1.0kb upstream 1.0kb upstream 2214 true ta_iwgsc_6as_v1_4397115: 3151-5364 Triticum aestivum
Traes_6AS_E159E095A 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_6as_v1_4397115: 4365-5364 Triticum aestivum
Traes_6AS_E159E095A 1.0kb downstream 1.0kb downstream 2214 true ta_iwgsc_6as_v1_4397115: 2151-4364 Triticum aestivum
Traes_6AS_E159E095A 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_6as_v1_4397115: 2151-3150 Triticum aestivum
Traes_6AS_E159E095A 2.0kb upstream 2.0kb upstream 3214 true ta_iwgsc_6as_v1_4397115: 3151-6364 Triticum aestivum
Traes_6AS_E159E095A 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_6as_v1_4397115: 4365-6364 Triticum aestivum
Traes_6AS_E159E095A 2.0kb downstream 2.0kb downstream 3214 true ta_iwgsc_6as_v1_4397115: 1151-4364 Triticum aestivum
Traes_6AS_E159E095A 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_6as_v1_4397115: 1151-3150 Triticum aestivum
Traes_6AS_E159E095A 5.0kb upstream 5.0kb upstream 3359 true ta_iwgsc_6as_v1_4397115: 3151-6509 Triticum aestivum
Traes_6AS_E159E095A 5.0kb upstream 5.0kb upstream 2145 false ta_iwgsc_6as_v1_4397115: 4365-6509 Triticum aestivum
Traes_6AS_E159E095A 5.0kb downstream 5.0kb downstream 4364 true ta_iwgsc_6as_v1_4397115: 1-4364 Triticum aestivum
Traes_6AS_E159E095A 5.0kb downstream 5.0kb downstream 3150 false ta_iwgsc_6as_v1_4397115: 1-3150 Triticum aestivum
Traes_6AS_E159E095A 10.0kb upstream 10.0kb upstream 3359 true ta_iwgsc_6as_v1_4397115: 3151-6509 Triticum aestivum
Traes_6AS_E159E095A 10.0kb upstream 10.0kb upstream 2145 false ta_iwgsc_6as_v1_4397115: 4365-6509 Triticum aestivum
Traes_6AS_E159E095A 10.0kb downstream 10.0kb downstream 4364 true ta_iwgsc_6as_v1_4397115: 1-4364 Triticum aestivum
Traes_6AS_E159E095A 10.0kb downstream 10.0kb downstream 3150 false ta_iwgsc_6as_v1_4397115: 1-3150 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026648 5273 Angiosperm View MSA
124582543 5269 Grass View MSA
121296450 5274 Embryophyte View MSA
123428003 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain