Gene : Traes_6DS_A879508C3 T. aestivum v2.2
Defline:  (1 of 3) PTHR11699:SF49 - SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL Genomic Order:  2
Name:  ? Traes_6DS_A879508C3 Secondary Identifier:  ? PAC:31897184
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Taestivum PWY-4321 Triticum aestivum pathologic  
Taestivum PWY-6473 Triticum aestivum pathologic  
Taestivum PWY-6535 Triticum aestivum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_6DS_A879508C3 0.5kb upstream 0.5kb upstream 10505 true ta_iwgsc_6ds_v1_2059367: 19298-29802 Triticum aestivum
Traes_6DS_A879508C3 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_6ds_v1_2059367: 19298-19797 Triticum aestivum
Traes_6DS_A879508C3 0.5kb downstream 0.5kb downstream 10505 true ta_iwgsc_6ds_v1_2059367: 19798-30302 Triticum aestivum
Traes_6DS_A879508C3 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_6ds_v1_2059367: 29803-30302 Triticum aestivum
Traes_6DS_A879508C3 1.0kb upstream 1.0kb upstream 11005 true ta_iwgsc_6ds_v1_2059367: 18798-29802 Triticum aestivum
Traes_6DS_A879508C3 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_6ds_v1_2059367: 18798-19797 Triticum aestivum
Traes_6DS_A879508C3 1.0kb downstream 1.0kb downstream 11005 true ta_iwgsc_6ds_v1_2059367: 19798-30802 Triticum aestivum
Traes_6DS_A879508C3 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_6ds_v1_2059367: 29803-30802 Triticum aestivum
Traes_6DS_A879508C3 2.0kb upstream 2.0kb upstream 12005 true ta_iwgsc_6ds_v1_2059367: 17798-29802 Triticum aestivum
Traes_6DS_A879508C3 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_6ds_v1_2059367: 17798-19797 Triticum aestivum
Traes_6DS_A879508C3 2.0kb downstream 2.0kb downstream 12005 true ta_iwgsc_6ds_v1_2059367: 19798-31802 Triticum aestivum
Traes_6DS_A879508C3 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_6ds_v1_2059367: 29803-31802 Triticum aestivum
Traes_6DS_A879508C3 5.0kb upstream 5.0kb upstream 15005 true ta_iwgsc_6ds_v1_2059367: 14798-29802 Triticum aestivum
Traes_6DS_A879508C3 5.0kb upstream 5.0kb upstream 5000 false ta_iwgsc_6ds_v1_2059367: 14798-19797 Triticum aestivum
Traes_6DS_A879508C3 5.0kb downstream 5.0kb downstream 13511 true ta_iwgsc_6ds_v1_2059367: 19798-33308 Triticum aestivum
Traes_6DS_A879508C3 5.0kb downstream 5.0kb downstream 3506 false ta_iwgsc_6ds_v1_2059367: 29803-33308 Triticum aestivum
Traes_6DS_A879508C3 10.0kb upstream 10.0kb upstream 20005 true ta_iwgsc_6ds_v1_2059367: 9798-29802 Triticum aestivum
Traes_6DS_A879508C3 10.0kb upstream 10.0kb upstream 10000 false ta_iwgsc_6ds_v1_2059367: 9798-19797 Triticum aestivum
Traes_6DS_A879508C3 10.0kb downstream 10.0kb downstream 13511 true ta_iwgsc_6ds_v1_2059367: 19798-33308 Triticum aestivum
Traes_6DS_A879508C3 10.0kb downstream 10.0kb downstream 3506 false ta_iwgsc_6ds_v1_2059367: 29803-33308 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585020 5269 Grass View MSA
122045886 5273 Angiosperm View MSA
121345720 5274 Embryophyte View MSA
123427690 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain