Gene : Traes_7DL_1AA9C00A3 T. aestivum v2.2
Defline:  (1 of 6) PTHR10920:SF12 - TRNA (CYTIDINE(32)/GUANOSINE(34)-2'-O)-METHYLTRANSFERASE-RELATED Genomic Order:  1
Name:  ? Traes_7DL_1AA9C00A3 Secondary Identifier:  ? PAC:31781711
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Taestivum PWY-6829 Triticum aestivum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_7DL_1AA9C00A3 0.5kb upstream 0.5kb upstream 3590 true ta_iwgsc_7dl_v1_3390130: 2812-6401 Triticum aestivum
Traes_7DL_1AA9C00A3 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_7dl_v1_3390130: 2812-3311 Triticum aestivum
Traes_7DL_1AA9C00A3 0.5kb downstream 0.5kb downstream 3580 true ta_iwgsc_7dl_v1_3390130: 3312-6891 Triticum aestivum
Traes_7DL_1AA9C00A3 0.5kb downstream 0.5kb downstream 490 false ta_iwgsc_7dl_v1_3390130: 6402-6891 Triticum aestivum
Traes_7DL_1AA9C00A3 1.0kb upstream 1.0kb upstream 4090 true ta_iwgsc_7dl_v1_3390130: 2312-6401 Triticum aestivum
Traes_7DL_1AA9C00A3 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_7dl_v1_3390130: 2312-3311 Triticum aestivum
Traes_7DL_1AA9C00A3 1.0kb downstream 1.0kb downstream 3580 true ta_iwgsc_7dl_v1_3390130: 3312-6891 Triticum aestivum
Traes_7DL_1AA9C00A3 1.0kb downstream 1.0kb downstream 490 false ta_iwgsc_7dl_v1_3390130: 6402-6891 Triticum aestivum
Traes_7DL_1AA9C00A3 2.0kb upstream 2.0kb upstream 5090 true ta_iwgsc_7dl_v1_3390130: 1312-6401 Triticum aestivum
Traes_7DL_1AA9C00A3 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_7dl_v1_3390130: 1312-3311 Triticum aestivum
Traes_7DL_1AA9C00A3 2.0kb downstream 2.0kb downstream 3580 true ta_iwgsc_7dl_v1_3390130: 3312-6891 Triticum aestivum
Traes_7DL_1AA9C00A3 2.0kb downstream 2.0kb downstream 490 false ta_iwgsc_7dl_v1_3390130: 6402-6891 Triticum aestivum
Traes_7DL_1AA9C00A3 5.0kb upstream 5.0kb upstream 6401 true ta_iwgsc_7dl_v1_3390130: 1-6401 Triticum aestivum
Traes_7DL_1AA9C00A3 5.0kb upstream 5.0kb upstream 3311 false ta_iwgsc_7dl_v1_3390130: 1-3311 Triticum aestivum
Traes_7DL_1AA9C00A3 5.0kb downstream 5.0kb downstream 3580 true ta_iwgsc_7dl_v1_3390130: 3312-6891 Triticum aestivum
Traes_7DL_1AA9C00A3 5.0kb downstream 5.0kb downstream 490 false ta_iwgsc_7dl_v1_3390130: 6402-6891 Triticum aestivum
Traes_7DL_1AA9C00A3 10.0kb upstream 10.0kb upstream 6401 true ta_iwgsc_7dl_v1_3390130: 1-6401 Triticum aestivum
Traes_7DL_1AA9C00A3 10.0kb upstream 10.0kb upstream 3311 false ta_iwgsc_7dl_v1_3390130: 1-3311 Triticum aestivum
Traes_7DL_1AA9C00A3 10.0kb downstream 10.0kb downstream 3580 true ta_iwgsc_7dl_v1_3390130: 3312-6891 Triticum aestivum
Traes_7DL_1AA9C00A3 10.0kb downstream 10.0kb downstream 490 false ta_iwgsc_7dl_v1_3390130: 6402-6891 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575975 5269 Grass View MSA
122044785 5273 Angiosperm View MSA
121347520 5274 Embryophyte View MSA
123424894 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain