Gene : 266613 S. moellendorffii v1.0
Defline:  (1 of 1) PTHR13789:SF249 - LYCOPENE BETA CYCLASE, CHLOROPLASTIC Genomic Order:  320
Name:  ? 266613 Secondary Identifier:  ? PAC:15409768
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Smoellendorffii CAROTENOID-PWY Selaginella moellendorffii pathologic  
Smoellendorffii PWY-5943 Selaginella moellendorffii pathologic  
Smoellendorffii PWY-5947 Selaginella moellendorffii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
266613 0.5kb upstream 0.5kb upstream 2540 true scaffold_1: 2599797-2602336 Selaginella moellendorffii
266613 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2599797-2600296 Selaginella moellendorffii
266613 0.5kb downstream 0.5kb downstream 2540 true scaffold_1: 2600297-2602836 Selaginella moellendorffii
266613 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2602337-2602836 Selaginella moellendorffii
266613 1.0kb upstream 1.0kb upstream 3040 true scaffold_1: 2599297-2602336 Selaginella moellendorffii
266613 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2599297-2600296 Selaginella moellendorffii
266613 1.0kb downstream 1.0kb downstream 3040 true scaffold_1: 2600297-2603336 Selaginella moellendorffii
266613 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2602337-2603336 Selaginella moellendorffii
266613 2.0kb upstream 2.0kb upstream 4040 true scaffold_1: 2598297-2602336 Selaginella moellendorffii
266613 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2598297-2600296 Selaginella moellendorffii
266613 2.0kb downstream 2.0kb downstream 4040 true scaffold_1: 2600297-2604336 Selaginella moellendorffii
266613 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2602337-2604336 Selaginella moellendorffii
266613 5.0kb upstream 5.0kb upstream 7040 true scaffold_1: 2595297-2602336 Selaginella moellendorffii
266613 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2595297-2600296 Selaginella moellendorffii
266613 5.0kb downstream 5.0kb downstream 7040 true scaffold_1: 2600297-2607336 Selaginella moellendorffii
266613 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2602337-2607336 Selaginella moellendorffii
266613 10.0kb upstream 10.0kb upstream 12040 true scaffold_1: 2590297-2602336 Selaginella moellendorffii
266613 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2590297-2600296 Selaginella moellendorffii
266613 10.0kb downstream 10.0kb downstream 12040 true scaffold_1: 2600297-2612336 Selaginella moellendorffii
266613 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2602337-2612336 Selaginella moellendorffii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121345644 5274 Embryophyte View MSA
123423874 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain