Gene : orange1.1g009971m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR22572:SF101 - GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE SMALL SUBUNIT, CHLOROPLASTIC Genomic Order:  4
Name:  ? orange1.1g009971m.g Secondary Identifier:  ? PAC:18126970
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis GLYCOGENSYNTH-PWY Citrus sinensis pathologic  
Csinensis PWY-622 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g009971m.g 0.5kb upstream 0.5kb upstream 3503 true scaffold00647: 31472-34974 Citrus sinensis
orange1.1g009971m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00647: 31472-31971 Citrus sinensis
orange1.1g009971m.g 0.5kb downstream 0.5kb downstream 3503 true scaffold00647: 31972-35474 Citrus sinensis
orange1.1g009971m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00647: 34975-35474 Citrus sinensis
orange1.1g009971m.g 1.0kb upstream 1.0kb upstream 4003 true scaffold00647: 30972-34974 Citrus sinensis
orange1.1g009971m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00647: 30972-31971 Citrus sinensis
orange1.1g009971m.g 1.0kb downstream 1.0kb downstream 4003 true scaffold00647: 31972-35974 Citrus sinensis
orange1.1g009971m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00647: 34975-35974 Citrus sinensis
orange1.1g009971m.g 2.0kb upstream 2.0kb upstream 5003 true scaffold00647: 29972-34974 Citrus sinensis
orange1.1g009971m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00647: 29972-31971 Citrus sinensis
orange1.1g009971m.g 2.0kb downstream 2.0kb downstream 5003 true scaffold00647: 31972-36974 Citrus sinensis
orange1.1g009971m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00647: 34975-36974 Citrus sinensis
orange1.1g009971m.g 5.0kb upstream 5.0kb upstream 8003 true scaffold00647: 26972-34974 Citrus sinensis
orange1.1g009971m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00647: 26972-31971 Citrus sinensis
orange1.1g009971m.g 5.0kb downstream 5.0kb downstream 8003 true scaffold00647: 31972-39974 Citrus sinensis
orange1.1g009971m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00647: 34975-39974 Citrus sinensis
orange1.1g009971m.g 10.0kb upstream 10.0kb upstream 13003 true scaffold00647: 21972-34974 Citrus sinensis
orange1.1g009971m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00647: 21972-31971 Citrus sinensis
orange1.1g009971m.g 10.0kb downstream 10.0kb downstream 13003 true scaffold00647: 31972-44974 Citrus sinensis
orange1.1g009971m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00647: 34975-44974 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124346329 5266 SBM View MSA
124239749 5268 Malvidae View MSA
124067564 5270 Rosid View MSA
123737587 5271 Pentapetalae View MSA
122787627 5272 Eudicot View MSA
122044250 5273 Angiosperm View MSA
121350002 5274 Embryophyte View MSA
123424956 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain