Gene : orange1.1g004562m.g C. sinensis v1.1
Defline:  (1 of 2) PF03552//PF13632 - Cellulose synthase (Cellulose_synt) // Glycosyl transferase family group 2 (Glyco_trans_2_3) Genomic Order:  2
Name:  ? orange1.1g004562m.g Secondary Identifier:  ? PAC:18106375
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-1001 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g004562m.g 0.5kb upstream 0.5kb upstream 8558 true scaffold00700: 3941-12498 Citrus sinensis
orange1.1g004562m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00700: 11999-12498 Citrus sinensis
orange1.1g004562m.g 0.5kb downstream 0.5kb downstream 8558 true scaffold00700: 3441-11998 Citrus sinensis
orange1.1g004562m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00700: 3441-3940 Citrus sinensis
orange1.1g004562m.g 1.0kb upstream 1.0kb upstream 9058 true scaffold00700: 3941-12998 Citrus sinensis
orange1.1g004562m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00700: 11999-12998 Citrus sinensis
orange1.1g004562m.g 1.0kb downstream 1.0kb downstream 9058 true scaffold00700: 2941-11998 Citrus sinensis
orange1.1g004562m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00700: 2941-3940 Citrus sinensis
orange1.1g004562m.g 2.0kb upstream 2.0kb upstream 10058 true scaffold00700: 3941-13998 Citrus sinensis
orange1.1g004562m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00700: 11999-13998 Citrus sinensis
orange1.1g004562m.g 2.0kb downstream 2.0kb downstream 10058 true scaffold00700: 1941-11998 Citrus sinensis
orange1.1g004562m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00700: 1941-3940 Citrus sinensis
orange1.1g004562m.g 5.0kb upstream 5.0kb upstream 13058 true scaffold00700: 3941-16998 Citrus sinensis
orange1.1g004562m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00700: 11999-16998 Citrus sinensis
orange1.1g004562m.g 5.0kb downstream 5.0kb downstream 11998 true scaffold00700: 1-11998 Citrus sinensis
orange1.1g004562m.g 5.0kb downstream 5.0kb downstream 3940 false scaffold00700: 1-3940 Citrus sinensis
orange1.1g004562m.g 10.0kb upstream 10.0kb upstream 18058 true scaffold00700: 3941-21998 Citrus sinensis
orange1.1g004562m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00700: 11999-21998 Citrus sinensis
orange1.1g004562m.g 10.0kb downstream 10.0kb downstream 11998 true scaffold00700: 1-11998 Citrus sinensis
orange1.1g004562m.g 10.0kb downstream 10.0kb downstream 3940 false scaffold00700: 1-3940 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124351489 5266 SBM View MSA
124253777 5268 Malvidae View MSA
124070260 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain