Gene : orange1.1g015907m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR26312:SF0 - TETRATRICOPEPTIDE REPEAT PROTEIN 5 Genomic Order:  3
Name:  ? orange1.1g015907m.g Secondary Identifier:  ? PAC:18132857
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g015907m.g 0.5kb upstream 0.5kb upstream 13255 true scaffold00712: 49847-63101 Citrus sinensis
orange1.1g015907m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00712: 62602-63101 Citrus sinensis
orange1.1g015907m.g 0.5kb downstream 0.5kb downstream 13255 true scaffold00712: 49347-62601 Citrus sinensis
orange1.1g015907m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00712: 49347-49846 Citrus sinensis
orange1.1g015907m.g 1.0kb upstream 1.0kb upstream 13755 true scaffold00712: 49847-63601 Citrus sinensis
orange1.1g015907m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00712: 62602-63601 Citrus sinensis
orange1.1g015907m.g 1.0kb downstream 1.0kb downstream 13755 true scaffold00712: 48847-62601 Citrus sinensis
orange1.1g015907m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00712: 48847-49846 Citrus sinensis
orange1.1g015907m.g 2.0kb upstream 2.0kb upstream 14755 true scaffold00712: 49847-64601 Citrus sinensis
orange1.1g015907m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00712: 62602-64601 Citrus sinensis
orange1.1g015907m.g 2.0kb downstream 2.0kb downstream 14755 true scaffold00712: 47847-62601 Citrus sinensis
orange1.1g015907m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00712: 47847-49846 Citrus sinensis
orange1.1g015907m.g 5.0kb upstream 5.0kb upstream 17755 true scaffold00712: 49847-67601 Citrus sinensis
orange1.1g015907m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00712: 62602-67601 Citrus sinensis
orange1.1g015907m.g 5.0kb downstream 5.0kb downstream 17755 true scaffold00712: 44847-62601 Citrus sinensis
orange1.1g015907m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00712: 44847-49846 Citrus sinensis
orange1.1g015907m.g 10.0kb upstream 10.0kb upstream 22755 true scaffold00712: 49847-72601 Citrus sinensis
orange1.1g015907m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00712: 62602-72601 Citrus sinensis
orange1.1g015907m.g 10.0kb downstream 10.0kb downstream 22755 true scaffold00712: 39847-62601 Citrus sinensis
orange1.1g015907m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00712: 39847-49846 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041405 5273 Angiosperm View MSA
124321879 5266 SBM View MSA
124251725 5268 Malvidae View MSA
124065158 5270 Rosid View MSA
123747487 5271 Pentapetalae View MSA
122792226 5272 Eudicot View MSA
121343833 5274 Embryophyte View MSA
123426406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain