Gene : orange1.1g020188m.g C. sinensis v1.1
Defline:  (1 of 3) PTHR33428:SF2 - CHLOROPHYLLASE-1 Genomic Order:  2
Name:  ? orange1.1g020188m.g Secondary Identifier:  ? PAC:18128267
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-5098 Citrus sinensis pathologic  
Csinensis PWY-6927 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g020188m.g 0.5kb upstream 0.5kb upstream 1875 true scaffold00949: 10968-12842 Citrus sinensis
orange1.1g020188m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00949: 10968-11467 Citrus sinensis
orange1.1g020188m.g 0.5kb downstream 0.5kb downstream 1875 true scaffold00949: 11468-13342 Citrus sinensis
orange1.1g020188m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00949: 12843-13342 Citrus sinensis
orange1.1g020188m.g 1.0kb upstream 1.0kb upstream 2375 true scaffold00949: 10468-12842 Citrus sinensis
orange1.1g020188m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00949: 10468-11467 Citrus sinensis
orange1.1g020188m.g 1.0kb downstream 1.0kb downstream 2375 true scaffold00949: 11468-13842 Citrus sinensis
orange1.1g020188m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00949: 12843-13842 Citrus sinensis
orange1.1g020188m.g 2.0kb upstream 2.0kb upstream 3375 true scaffold00949: 9468-12842 Citrus sinensis
orange1.1g020188m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00949: 9468-11467 Citrus sinensis
orange1.1g020188m.g 2.0kb downstream 2.0kb downstream 3375 true scaffold00949: 11468-14842 Citrus sinensis
orange1.1g020188m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00949: 12843-14842 Citrus sinensis
orange1.1g020188m.g 5.0kb upstream 5.0kb upstream 6375 true scaffold00949: 6468-12842 Citrus sinensis
orange1.1g020188m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00949: 6468-11467 Citrus sinensis
orange1.1g020188m.g 5.0kb downstream 5.0kb downstream 6375 true scaffold00949: 11468-17842 Citrus sinensis
orange1.1g020188m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00949: 12843-17842 Citrus sinensis
orange1.1g020188m.g 10.0kb upstream 10.0kb upstream 11375 true scaffold00949: 1468-12842 Citrus sinensis
orange1.1g020188m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00949: 1468-11467 Citrus sinensis
orange1.1g020188m.g 10.0kb downstream 10.0kb downstream 11375 true scaffold00949: 11468-22842 Citrus sinensis
orange1.1g020188m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00949: 12843-22842 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026648 5273 Angiosperm View MSA
124339978 5266 SBM View MSA
124247394 5268 Malvidae View MSA
124064718 5270 Rosid View MSA
123753508 5271 Pentapetalae View MSA
122795782 5272 Eudicot View MSA
121296450 5274 Embryophyte View MSA
123428003 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain