Gene : orange1.1g015044m.g C. sinensis v1.1
Defline:  (1 of 2) PTHR30239:SF3 - ACETOLACTATE SYNTHASE SMALL SUBUNIT 2, CHLOROPLASTIC Genomic Order:  3
Name:  ? orange1.1g015044m.g Secondary Identifier:  ? PAC:18128836
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis BRANCHED-CHAIN-AA-SYN-PWY Citrus sinensis pathologic  
Csinensis ILEUSYN-PWY Citrus sinensis pathologic  
Csinensis PWY-3001 Citrus sinensis pathologic  
Csinensis VALSYN-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g015044m.g 0.5kb upstream 0.5kb upstream 6864 true scaffold01406: 12338-19201 Citrus sinensis
orange1.1g015044m.g 0.5kb upstream 0.5kb upstream 500 false scaffold01406: 18702-19201 Citrus sinensis
orange1.1g015044m.g 0.5kb downstream 0.5kb downstream 6864 true scaffold01406: 11838-18701 Citrus sinensis
orange1.1g015044m.g 0.5kb downstream 0.5kb downstream 500 false scaffold01406: 11838-12337 Citrus sinensis
orange1.1g015044m.g 1.0kb upstream 1.0kb upstream 7364 true scaffold01406: 12338-19701 Citrus sinensis
orange1.1g015044m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold01406: 18702-19701 Citrus sinensis
orange1.1g015044m.g 1.0kb downstream 1.0kb downstream 7364 true scaffold01406: 11338-18701 Citrus sinensis
orange1.1g015044m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold01406: 11338-12337 Citrus sinensis
orange1.1g015044m.g 2.0kb upstream 2.0kb upstream 8364 true scaffold01406: 12338-20701 Citrus sinensis
orange1.1g015044m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold01406: 18702-20701 Citrus sinensis
orange1.1g015044m.g 2.0kb downstream 2.0kb downstream 8364 true scaffold01406: 10338-18701 Citrus sinensis
orange1.1g015044m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold01406: 10338-12337 Citrus sinensis
orange1.1g015044m.g 5.0kb upstream 5.0kb upstream 11364 true scaffold01406: 12338-23701 Citrus sinensis
orange1.1g015044m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold01406: 18702-23701 Citrus sinensis
orange1.1g015044m.g 5.0kb downstream 5.0kb downstream 11364 true scaffold01406: 7338-18701 Citrus sinensis
orange1.1g015044m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold01406: 7338-12337 Citrus sinensis
orange1.1g015044m.g 10.0kb upstream 10.0kb upstream 13160 true scaffold01406: 12338-25497 Citrus sinensis
orange1.1g015044m.g 10.0kb upstream 10.0kb upstream 6796 false scaffold01406: 18702-25497 Citrus sinensis
orange1.1g015044m.g 10.0kb downstream 10.0kb downstream 16364 true scaffold01406: 2338-18701 Citrus sinensis
orange1.1g015044m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold01406: 2338-12337 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121531658 5273 Angiosperm Singleton cluster - no MSA
124331273 5266 SBM Singleton cluster - no MSA
124176520 5268 Malvidae Singleton cluster - no MSA
123899053 5270 Rosid Singleton cluster - no MSA
123480909 5271 Pentapetalae Singleton cluster - no MSA
122516161 5272 Eudicot Singleton cluster - no MSA
120804420 5274 Embryophyte Singleton cluster - no MSA
122845974 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain